Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 KRT18P23-201ENST00000435622 1283 ntBASIC20.77■□□□□ 0.92
ATN1P54259 REXO1L6P-202ENST00000619970 1078 ntBASIC20.77■□□□□ 0.92
ATN1P54259 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.77■□□□□ 0.92
ATN1P54259 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATN1P54259 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATN1P54259 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATN1P54259 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
ATN1P54259 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.77■□□□□ 0.91
ATN1P54259 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATN1P54259 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.76■□□□□ 0.91
ATN1P54259 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATN1P54259 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 LINC00565-201ENST00000562710 2331 ntBASIC20.76■□□□□ 0.91
ATN1P54259 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATN1P54259 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 MIR1233-2-201ENST00000408138 82 ntBASIC20.76■□□□□ 0.91
ATN1P54259 MIR1233-1-201ENST00000408722 82 ntBASIC20.76■□□□□ 0.91
ATN1P54259 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.76■□□□□ 0.91
ATN1P54259 RNA5SP419-201ENST00000515908 135 ntBASIC20.76■□□□□ 0.91
ATN1P54259 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ATN1P54259 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.76■□□□□ 0.91
ATN1P54259 AC064862.7-201ENST00000604520 867 ntBASIC20.76■□□□□ 0.91
ATN1P54259 AC010240.3-201ENST00000607688 395 ntBASIC20.76■□□□□ 0.91
ATN1P54259 AC124864.1-201ENST00000623408 392 ntBASIC20.76■□□□□ 0.91
ATN1P54259 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.76■□□□□ 0.91
ATN1P54259 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATN1P54259 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATN1P54259 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.75■□□□□ 0.91
ATN1P54259 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.75■□□□□ 0.91
ATN1P54259 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.75■□□□□ 0.91
ATN1P54259 AC092183.1-201ENST00000469884 875 ntBASIC20.75■□□□□ 0.91
ATN1P54259 POLD2P1-201ENST00000511220 997 ntBASIC20.75■□□□□ 0.91
ATN1P54259 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.75■□□□□ 0.91
ATN1P54259 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.75■□□□□ 0.91
ATN1P54259 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.75■□□□□ 0.91
ATN1P54259 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.75■□□□□ 0.91
ATN1P54259 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ATN1P54259 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.75■□□□□ 0.91
ATN1P54259 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATN1P54259 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATN1P54259 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 AC073314.1-201ENST00000568729 2216 ntBASIC20.74■□□□□ 0.91
ATN1P54259 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.74■□□□□ 0.91
ATN1P54259 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ATN1P54259 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.74■□□□□ 0.91
ATN1P54259 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.74■□□□□ 0.91
ATN1P54259 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ATN1P54259 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
ATN1P54259 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.74■□□□□ 0.91
ATN1P54259 MTND2P7-201ENST00000521337 640 ntBASIC20.74■□□□□ 0.91
ATN1P54259 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ATN1P54259 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ATN1P54259 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.74■□□□□ 0.91
ATN1P54259 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.74■□□□□ 0.91
ATN1P54259 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC20.74■□□□□ 0.91
ATN1P54259 AL592071.1-201ENST00000611956 408 ntBASIC20.74■□□□□ 0.91
ATN1P54259 AL773604.1-201ENST00000617417 272 ntBASIC20.74■□□□□ 0.91
ATN1P54259 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ATN1P54259 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.74■□□□□ 0.91
ATN1P54259 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATN1P54259 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms