Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC25A1P53007 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC25A1P53007 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC25A1P53007 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC25A1P53007 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
SLC25A1P53007 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLC25A1P53007 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC25A1P53007 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC25A1P53007 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SLC25A1P53007 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 ID1-201ENST00000376105 1233 ntBASIC16.77■□□□□ 0.28
SLC25A1P53007 NIFKP9-201ENST00000419265 221 ntBASIC16.77■□□□□ 0.28
SLC25A1P53007 AC004980.1-204ENST00000429707 299 ntBASIC16.77■□□□□ 0.28
SLC25A1P53007 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC25A1P53007 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 AC110285.5-201ENST00000611501 352 ntBASIC16.77■□□□□ 0.28
SLC25A1P53007 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 MYC-208ENST00000641036 567 ntBASIC16.77■□□□□ 0.28
SLC25A1P53007 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC25A1P53007 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC25A1P53007 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.77■□□□□ 0.27
SLC25A1P53007 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC25A1P53007 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC25A1P53007 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SLC25A1P53007 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC25A1P53007 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC25A1P53007 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC25A1P53007 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC25A1P53007 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
SLC25A1P53007 ABALON-201ENST00000629058 1903 ntBASIC16.76■□□□□ 0.27
SLC25A1P53007 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 NOC2LP1-202ENST00000452600 2235 ntBASIC16.76■□□□□ 0.27
SLC25A1P53007 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC25A1P53007 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC25A1P53007 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC25A1P53007 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC25A1P53007 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC25A1P53007 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC25A1P53007 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC25A1P53007 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC25A1P53007 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC25A1P53007 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SLC25A1P53007 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC25A1P53007 RN7SL471P-201ENST00000580476 299 ntBASIC16.75■□□□□ 0.27
SLC25A1P53007 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC25A1P53007 AL353708.3-201ENST00000610272 989 ntBASIC16.75■□□□□ 0.27
SLC25A1P53007 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC25A1P53007 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC25A1P53007 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC25A1P53007 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC25A1P53007 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC25A1P53007 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC25A1P53007 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms