Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR2JP52435 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2JP52435 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR2JP52435 AC098934.4-201ENST00000564127 592 ntBASIC18.06■□□□□ 0.48
POLR2JP52435 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
POLR2JP52435 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 AC068880.1-201ENST00000507289 2297 ntBASIC18.06■□□□□ 0.48
POLR2JP52435 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2JP52435 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
POLR2JP52435 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
POLR2JP52435 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
POLR2JP52435 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
POLR2JP52435 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
POLR2JP52435 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLR2JP52435 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
POLR2JP52435 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.05■□□□□ 0.48
POLR2JP52435 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR2JP52435 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.05■□□□□ 0.48
POLR2JP52435 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR2JP52435 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLR2JP52435 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.05■□□□□ 0.48
POLR2JP52435 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
POLR2JP52435 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.05■□□□□ 0.48
POLR2JP52435 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR2JP52435 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLR2JP52435 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2JP52435 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
POLR2JP52435 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR2JP52435 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR2JP52435 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2JP52435 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.04■□□□□ 0.48
POLR2JP52435 PRKY-204ENST00000533551 1019 ntBASIC18.04■□□□□ 0.48
POLR2JP52435 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.04■□□□□ 0.48
POLR2JP52435 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2JP52435 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.04■□□□□ 0.48
POLR2JP52435 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.04■□□□□ 0.48
POLR2JP52435 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR2JP52435 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.04■□□□□ 0.48
POLR2JP52435 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR2JP52435 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
POLR2JP52435 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR2JP52435 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2JP52435 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 HEIH-201ENST00000623091 1652 ntBASIC18.03■□□□□ 0.48
POLR2JP52435 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
POLR2JP52435 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
POLR2JP52435 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 UNC93B4-201ENST00000505679 747 ntBASIC18.03■□□□□ 0.48
POLR2JP52435 AL138781.1-201ENST00000566567 1274 ntBASIC18.03■□□□□ 0.48
POLR2JP52435 C1QL1P1-201ENST00000568105 661 ntBASIC18.03■□□□□ 0.48
POLR2JP52435 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
POLR2JP52435 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms