Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
NEK3P51956 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.44■□□□□ 0.7
NEK3P51956 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.44■□□□□ 0.7
NEK3P51956 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NEK3P51956 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 AC097488.1-201ENST00000507834 756 ntBASIC19.44■□□□□ 0.7
NEK3P51956 AP000692.2-201ENST00000608391 879 ntBASIC19.44■□□□□ 0.7
NEK3P51956 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.44■□□□□ 0.7
NEK3P51956 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.44■□□□□ 0.7
NEK3P51956 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.44■□□□□ 0.7
NEK3P51956 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NEK3P51956 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NEK3P51956 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
NEK3P51956 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
NEK3P51956 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NEK3P51956 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NEK3P51956 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NEK3P51956 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.43■□□□□ 0.7
NEK3P51956 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NEK3P51956 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
NEK3P51956 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.43■□□□□ 0.7
NEK3P51956 FAM207BP-201ENST00000447172 505 ntBASIC19.43■□□□□ 0.7
NEK3P51956 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.43■□□□□ 0.7
NEK3P51956 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.43■□□□□ 0.7
NEK3P51956 AC145285.6-201ENST00000604632 637 ntBASIC19.43■□□□□ 0.7
NEK3P51956 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.43■□□□□ 0.7
NEK3P51956 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
NEK3P51956 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK3P51956 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
NEK3P51956 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK3P51956 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.42■□□□□ 0.7
NEK3P51956 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 AC005332.8-201ENST00000622750 2735 ntBASIC19.42■□□□□ 0.7
NEK3P51956 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.42■□□□□ 0.7
NEK3P51956 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK3P51956 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NEK3P51956 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 CRYGFP-201ENST00000418459 633 ntBASIC19.42■□□□□ 0.7
NEK3P51956 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.42■□□□□ 0.7
NEK3P51956 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK3P51956 SLC25A1P4-201ENST00000567977 778 ntBASIC19.42■□□□□ 0.7
NEK3P51956 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NEK3P51956 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK3P51956 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NEK3P51956 AC009113.1-201ENST00000570267 2443 ntBASIC19.42■□□□□ 0.7
NEK3P51956 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK3P51956 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.42■□□□□ 0.7
NEK3P51956 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 CYP2D8P-201ENST00000433633 1490 ntBASIC19.41■□□□□ 0.7
NEK3P51956 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK3P51956 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK3P51956 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK3P51956 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK3P51956 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NEK3P51956 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NEK3P51956 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 FAM210CP-201ENST00000445714 574 ntBASIC19.41■□□□□ 0.7
NEK3P51956 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.41■□□□□ 0.7
NEK3P51956 AC008040.2-201ENST00000461049 708 ntBASIC19.41■□□□□ 0.7
NEK3P51956 AC091390.4-202ENST00000476426 537 ntBASIC19.41■□□□□ 0.7
NEK3P51956 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.41■□□□□ 0.7
NEK3P51956 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.41■□□□□ 0.7
NEK3P51956 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms