Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN3P51790 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLCN3P51790 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN3P51790 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN3P51790 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN3P51790 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLCN3P51790 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLCN3P51790 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN3P51790 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN3P51790 AL109659.2-201ENST00000606809 1674 ntBASIC20.73■□□□□ 0.91
CLCN3P51790 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLCN3P51790 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN3P51790 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 AIRN-201ENST00000601203 4374 ntBASIC20.72■□□□□ 0.91
CLCN3P51790 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLCN3P51790 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCN3P51790 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN3P51790 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.72■□□□□ 0.91
CLCN3P51790 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCN3P51790 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCN3P51790 RASA4DP-201ENST00000460726 1199 ntBASIC20.72■□□□□ 0.91
CLCN3P51790 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.72■□□□□ 0.91
CLCN3P51790 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN3P51790 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN3P51790 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN3P51790 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN3P51790 IER3-202ENST00000376377 1350 ntBASIC20.72■□□□□ 0.91
CLCN3P51790 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 KRT8P32-201ENST00000512863 1461 ntBASIC20.71■□□□□ 0.91
CLCN3P51790 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.71■□□□□ 0.91
CLCN3P51790 SEC1P-202ENST00000473944 940 ntBASIC20.71■□□□□ 0.91
CLCN3P51790 AC092597.1-201ENST00000487352 616 ntBASIC20.71■□□□□ 0.91
CLCN3P51790 VENTXP5-201ENST00000523979 775 ntBASIC20.71■□□□□ 0.91
CLCN3P51790 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 ZNF444P1-201ENST00000559497 298 ntBASIC20.71■□□□□ 0.91
CLCN3P51790 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.71■□□□□ 0.91
CLCN3P51790 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.71■□□□□ 0.91
CLCN3P51790 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN3P51790 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN3P51790 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLCN3P51790 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN3P51790 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLCN3P51790 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CLCN3P51790 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN3P51790 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 SPDYE13P-201ENST00000445314 798 ntBASIC20.7■□□□□ 0.9
CLCN3P51790 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN3P51790 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN3P51790 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN3P51790 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN3P51790 AC112497.1-201ENST00000624824 639 ntBASIC20.7■□□□□ 0.9
CLCN3P51790 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCN3P51790 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLCN3P51790 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN3P51790 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLCN3P51790 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN3P51790 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCN3P51790 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms