Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.84■□□□□ 0.29
LHX2P50458 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LHX2P50458 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LHX2P50458 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.84■□□□□ 0.29
LHX2P50458 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.84■□□□□ 0.29
LHX2P50458 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX2P50458 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LHX2P50458 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LHX2P50458 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LHX2P50458 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LHX2P50458 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.83■□□□□ 0.28
LHX2P50458 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.83■□□□□ 0.28
LHX2P50458 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.83■□□□□ 0.28
LHX2P50458 AC087388.1-201ENST00000571370 1112 ntBASIC16.83■□□□□ 0.28
LHX2P50458 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.83■□□□□ 0.28
LHX2P50458 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LHX2P50458 MYC-208ENST00000641036 567 ntBASIC16.83■□□□□ 0.28
LHX2P50458 AC068587.9-201ENST00000641814 219 ntBASIC16.83■□□□□ 0.28
LHX2P50458 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LHX2P50458 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LHX2P50458 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 AL049812.1-201ENST00000432563 2267 ntBASIC16.82■□□□□ 0.28
LHX2P50458 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LHX2P50458 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.82■□□□□ 0.28
LHX2P50458 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.82■□□□□ 0.28
LHX2P50458 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.82■□□□□ 0.28
LHX2P50458 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LHX2P50458 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.82■□□□□ 0.28
LHX2P50458 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
LHX2P50458 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.82■□□□□ 0.28
LHX2P50458 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LHX2P50458 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.82■□□□□ 0.28
LHX2P50458 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
LHX2P50458 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.81■□□□□ 0.28
LHX2P50458 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
LHX2P50458 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
LHX2P50458 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.81■□□□□ 0.28
LHX2P50458 MIR564-202ENST00000385049 94 ntBASIC16.81■□□□□ 0.28
LHX2P50458 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.81■□□□□ 0.28
LHX2P50458 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.81■□□□□ 0.28
LHX2P50458 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LHX2P50458 AL359075.1-203ENST00000462729 1002 ntBASIC16.81■□□□□ 0.28
LHX2P50458 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms