Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCLP35914 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
HMGCLP35914 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCLP35914 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCLP35914 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.76■□□□□ 0.59
HMGCLP35914 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 MTMR9LP-203ENST00000426597 1545 ntBASIC18.76■□□□□ 0.59
HMGCLP35914 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.76■□□□□ 0.59
HMGCLP35914 MCCD1P1-208ENST00000445732 328 ntBASIC18.76■□□□□ 0.59
HMGCLP35914 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCLP35914 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCLP35914 AC097493.4-201ENST00000641197 219 ntBASIC18.76■□□□□ 0.59
HMGCLP35914 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCLP35914 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLP35914 AC008556.1-201ENST00000610908 2040 ntBASIC18.76■□□□□ 0.59
HMGCLP35914 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLP35914 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCLP35914 AL031598.1-201ENST00000561511 1773 ntBASIC18.76■□□□□ 0.59
HMGCLP35914 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCLP35914 AC093503.3-201ENST00000624917 2352 ntBASIC18.75■□□□□ 0.59
HMGCLP35914 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCLP35914 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.75■□□□□ 0.59
HMGCLP35914 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCLP35914 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCLP35914 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCLP35914 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCLP35914 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCLP35914 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HMGCLP35914 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCLP35914 FAM87A-204ENST00000613235 858 ntBASIC18.75■□□□□ 0.59
HMGCLP35914 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
HMGCLP35914 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCLP35914 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 Z98044.1-201ENST00000632503 1764 ntBASIC18.75■□□□□ 0.59
HMGCLP35914 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLP35914 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
HMGCLP35914 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLP35914 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMGCLP35914 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 AIRN-201ENST00000601203 4374 ntBASIC18.74■□□□□ 0.59
HMGCLP35914 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLP35914 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCLP35914 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 ECEL1P2-202ENST00000465689 757 ntBASIC18.74■□□□□ 0.59
HMGCLP35914 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCLP35914 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLP35914 AC133561.5-201ENST00000635547 218 ntBASIC18.74■□□□□ 0.59
HMGCLP35914 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLP35914 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLP35914 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HMGCLP35914 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCLP35914 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLP35914 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLP35914 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.73■□□□□ 0.59
HMGCLP35914 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLP35914 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLP35914 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLP35914 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCLP35914 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms