Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.44■■□□□ 1.02
CLCN1P35523 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CLCN1P35523 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CLCN1P35523 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN1P35523 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN1P35523 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.44■■□□□ 1.02
CLCN1P35523 C2orf69P4-201ENST00000565394 541 ntBASIC21.44■■□□□ 1.02
CLCN1P35523 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.44■■□□□ 1.02
CLCN1P35523 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CLCN1P35523 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLCN1P35523 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLCN1P35523 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CLCN1P35523 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.43■■□□□ 1.02
CLCN1P35523 MST1L-201ENST00000442552 2185 ntBASIC21.43■■□□□ 1.02
CLCN1P35523 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.43■■□□□ 1.02
CLCN1P35523 AC083906.2-201ENST00000511578 360 ntBASIC21.43■■□□□ 1.02
CLCN1P35523 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.43■■□□□ 1.02
CLCN1P35523 AC092666.2-201ENST00000613287 246 ntBASIC21.43■■□□□ 1.02
CLCN1P35523 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.43■■□□□ 1.02
CLCN1P35523 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.43■■□□□ 1.02
CLCN1P35523 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLCN1P35523 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN1P35523 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.43■■□□□ 1.02
CLCN1P35523 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLCN1P35523 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.43■■□□□ 1.02
CLCN1P35523 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.42■■□□□ 1.02
CLCN1P35523 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CLCN1P35523 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.42■■□□□ 1.02
CLCN1P35523 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 KRT8P17-201ENST00000453110 1448 ntBASIC21.42■■□□□ 1.02
CLCN1P35523 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.42■■□□□ 1.02
CLCN1P35523 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.42■■□□□ 1.02
CLCN1P35523 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.42■■□□□ 1.02
CLCN1P35523 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
CLCN1P35523 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CLCN1P35523 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN1P35523 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN1P35523 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CLCN1P35523 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 BX276092.2-201ENST00000417668 665 ntBASIC21.41■■□□□ 1.02
CLCN1P35523 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.41■■□□□ 1.02
CLCN1P35523 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.41■■□□□ 1.02
CLCN1P35523 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN1P35523 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.41■■□□□ 1.02
CLCN1P35523 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN1P35523 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.41■■□□□ 1.02
CLCN1P35523 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN1P35523 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
CLCN1P35523 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CLCN1P35523 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN1P35523 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN1P35523 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN1P35523 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 AC108860.2-201ENST00000562760 2183 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms