Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXA11P31270 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXA11P31270 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.41■□□□□ 0.86
HOXA11P31270 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXA11P31270 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXA11P31270 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXA11P31270 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXA11P31270 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXA11P31270 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXA11P31270 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXA11P31270 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXA11P31270 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXA11P31270 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXA11P31270 AC079602.3-201ENST00000623931 403 ntBASIC20.4■□□□□ 0.86
HOXA11P31270 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HOXA11P31270 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
HOXA11P31270 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 AC005332.7-201ENST00000614046 2005 ntBASIC20.39■□□□□ 0.86
HOXA11P31270 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.39■□□□□ 0.86
HOXA11P31270 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HOXA11P31270 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXA11P31270 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 HOXB1-202ENST00000577092 1414 ntBASIC20.39■□□□□ 0.85
HOXA11P31270 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
HOXA11P31270 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.39■□□□□ 0.85
HOXA11P31270 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.39■□□□□ 0.85
HOXA11P31270 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 MIR3917-201ENST00000580971 93 ntBASIC20.39■□□□□ 0.85
HOXA11P31270 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXA11P31270 AL157888.1-201ENST00000631930 593 ntBASIC20.39■□□□□ 0.85
HOXA11P31270 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HOXA11P31270 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HOXA11P31270 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
HOXA11P31270 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HOXA11P31270 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXA11P31270 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
HOXA11P31270 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXA11P31270 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXA11P31270 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXA11P31270 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.38■□□□□ 0.85
HOXA11P31270 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXA11P31270 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXA11P31270 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
HOXA11P31270 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 KRT8P7-201ENST00000533003 1432 ntBASIC20.38■□□□□ 0.85
HOXA11P31270 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXA11P31270 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
HOXA11P31270 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
HOXA11P31270 KRT18P23-201ENST00000435622 1283 ntBASIC20.38■□□□□ 0.85
HOXA11P31270 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXA11P31270 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXA11P31270 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXA11P31270 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
HOXA11P31270 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXA11P31270 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXA11P31270 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXA11P31270 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXA11P31270 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HOXA11P31270 AL161938.1-201ENST00000569833 2180 ntBASIC20.37■□□□□ 0.85
HOXA11P31270 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXA11P31270 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXA11P31270 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HOXA11P31270 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXA11P31270 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.37■□□□□ 0.85
HOXA11P31270 AC104390.1-201ENST00000555663 520 ntBASIC20.37■□□□□ 0.85
HOXA11P31270 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXA11P31270 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.37■□□□□ 0.85
HOXA11P31270 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXA11P31270 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HOXA11P31270 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXA11P31270 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HOXA11P31270 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXA11P31270 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXA11P31270 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.36■□□□□ 0.85
HOXA11P31270 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXA11P31270 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXA11P31270 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HOXA11P31270 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXA11P31270 AL049812.1-201ENST00000432563 2267 ntBASIC20.36■□□□□ 0.85
HOXA11P31270 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms