Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA6P31267 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA6P31267 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA6P31267 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA6P31267 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA6P31267 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA6P31267 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA6P31267 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA6P31267 AC008556.1-201ENST00000610908 2040 ntBASIC18.62■□□□□ 0.57
HOXA6P31267 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HOXA6P31267 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HOXA6P31267 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOXA6P31267 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HOXA6P31267 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA6P31267 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA6P31267 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA6P31267 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXA6P31267 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HOXA6P31267 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXA6P31267 AC024563.2-201ENST00000603282 481 ntBASIC18.62■□□□□ 0.57
HOXA6P31267 AC124864.1-201ENST00000623408 392 ntBASIC18.62■□□□□ 0.57
HOXA6P31267 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA6P31267 IL9RP2-201ENST00000423948 1312 ntBASIC18.62■□□□□ 0.57
HOXA6P31267 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA6P31267 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA6P31267 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA6P31267 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HOXA6P31267 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXA6P31267 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXA6P31267 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA6P31267 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
HOXA6P31267 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA6P31267 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA6P31267 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA6P31267 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HOXA6P31267 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA6P31267 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.61■□□□□ 0.57
HOXA6P31267 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA6P31267 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.61■□□□□ 0.57
HOXA6P31267 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA6P31267 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HOXA6P31267 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA6P31267 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 AC034236.2-201ENST00000606662 1610 ntBASIC18.6■□□□□ 0.57
HOXA6P31267 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HOXA6P31267 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HOXA6P31267 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HOXA6P31267 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA6P31267 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA6P31267 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA6P31267 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.6■□□□□ 0.57
HOXA6P31267 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA6P31267 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOXA6P31267 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA6P31267 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.59■□□□□ 0.57
HOXA6P31267 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HOXA6P31267 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HOXA6P31267 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HOXA6P31267 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.59■□□□□ 0.57
HOXA6P31267 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HOXA6P31267 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 KRT18P58-201ENST00000527480 1120 ntBASIC18.59■□□□□ 0.57
HOXA6P31267 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.59■□□□□ 0.57
HOXA6P31267 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXA6P31267 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HOXA6P31267 TP73-AS1-207ENST00000624167 988 ntBASIC18.59■□□□□ 0.57
HOXA6P31267 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.59■□□□□ 0.57
HOXA6P31267 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HOXA6P31267 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXA6P31267 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA6P31267 GABARAPL3-202ENST00000624044 1851 ntBASIC18.58■□□□□ 0.57
HOXA6P31267 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXA6P31267 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms