Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
ATF1P18846 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.57■□□□□ 0.24
ATF1P18846 AC098934.4-201ENST00000564127 592 ntBASIC16.57■□□□□ 0.24
ATF1P18846 AL138781.1-201ENST00000566567 1274 ntBASIC16.57■□□□□ 0.24
ATF1P18846 SOX15-203ENST00000570788 1093 ntBASIC16.57■□□□□ 0.24
ATF1P18846 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.57■□□□□ 0.24
ATF1P18846 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.57■□□□□ 0.24
ATF1P18846 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
ATF1P18846 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.57■□□□□ 0.24
ATF1P18846 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATF1P18846 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATF1P18846 HCG11-201ENST00000411553 5696 ntBASIC16.56■□□□□ 0.24
ATF1P18846 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATF1P18846 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.56■□□□□ 0.24
ATF1P18846 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.56■□□□□ 0.24
ATF1P18846 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ATF1P18846 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.56■□□□□ 0.24
ATF1P18846 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATF1P18846 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATF1P18846 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.56■□□□□ 0.24
ATF1P18846 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
ATF1P18846 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.56■□□□□ 0.24
ATF1P18846 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.56■□□□□ 0.24
ATF1P18846 AC008687.6-201ENST00000596318 630 ntBASIC16.56■□□□□ 0.24
ATF1P18846 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ATF1P18846 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.56■□□□□ 0.24
ATF1P18846 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.56■□□□□ 0.24
ATF1P18846 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.56■□□□□ 0.24
ATF1P18846 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 AC073592.3-201ENST00000625118 1834 ntBASIC16.56■□□□□ 0.24
ATF1P18846 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATF1P18846 AC126763.1-201ENST00000552015 2118 ntBASIC16.55■□□□□ 0.24
ATF1P18846 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATF1P18846 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATF1P18846 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.55■□□□□ 0.24
ATF1P18846 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.55■□□□□ 0.24
ATF1P18846 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
ATF1P18846 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.55■□□□□ 0.24
ATF1P18846 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.55■□□□□ 0.24
ATF1P18846 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.55■□□□□ 0.24
ATF1P18846 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.55■□□□□ 0.24
ATF1P18846 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.55■□□□□ 0.24
ATF1P18846 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.55■□□□□ 0.24
ATF1P18846 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.55■□□□□ 0.24
ATF1P18846 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.55■□□□□ 0.24
ATF1P18846 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.55■□□□□ 0.24
ATF1P18846 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.55■□□□□ 0.24
ATF1P18846 AC133041.1-202ENST00000642053 222 ntBASIC16.55■□□□□ 0.24
ATF1P18846 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.55■□□□□ 0.24
ATF1P18846 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 AC008764.6-201ENST00000595909 2069 ntBASIC16.55■□□□□ 0.24
ATF1P18846 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.55■□□□□ 0.24
ATF1P18846 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.55■□□□□ 0.24
ATF1P18846 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATF1P18846 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms