Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.95■□□□□ 0.62
VCLP18206 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VCLP18206 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.95■□□□□ 0.62
VCLP18206 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VCLP18206 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.94■□□□□ 0.62
VCLP18206 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VCLP18206 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VCLP18206 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.94■□□□□ 0.62
VCLP18206 RBM17P1-201ENST00000453646 1190 ntBASIC18.94■□□□□ 0.62
VCLP18206 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.94■□□□□ 0.62
VCLP18206 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 BX088651.1-201ENST00000540551 451 ntBASIC18.94■□□□□ 0.62
VCLP18206 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VCLP18206 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.94■□□□□ 0.62
VCLP18206 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.94■□□□□ 0.62
VCLP18206 AC073912.3-201ENST00000624414 853 ntBASIC18.94■□□□□ 0.62
VCLP18206 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.94■□□□□ 0.62
VCLP18206 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCLP18206 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.94■□□□□ 0.62
VCLP18206 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
VCLP18206 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VCLP18206 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
VCLP18206 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VCLP18206 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VCLP18206 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.93■□□□□ 0.62
VCLP18206 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.93■□□□□ 0.62
VCLP18206 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VCLP18206 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCLP18206 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
VCLP18206 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.92■□□□□ 0.62
VCLP18206 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VCLP18206 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.92■□□□□ 0.62
VCLP18206 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.92■□□□□ 0.62
VCLP18206 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VCLP18206 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 FAM207BP-201ENST00000447172 505 ntBASIC18.92■□□□□ 0.62
VCLP18206 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
VCLP18206 Z85996.1-201ENST00000494644 937 ntBASIC18.92■□□□□ 0.62
VCLP18206 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.92■□□□□ 0.62
VCLP18206 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.92■□□□□ 0.62
VCLP18206 AC130371.2-201ENST00000619443 611 ntBASIC18.92■□□□□ 0.62
VCLP18206 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
VCLP18206 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms