Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.46■■□□□ 1.03
COL11A1P12107 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.46■■□□□ 1.03
COL11A1P12107 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.46■■□□□ 1.03
COL11A1P12107 HEIH-201ENST00000623091 1652 ntBASIC21.46■■□□□ 1.03
COL11A1P12107 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.45■■□□□ 1.03
COL11A1P12107 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.03
COL11A1P12107 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.45■■□□□ 1.03
COL11A1P12107 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.03
COL11A1P12107 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.45■■□□□ 1.03
COL11A1P12107 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COL11A1P12107 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
COL11A1P12107 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A1P12107 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A1P12107 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
COL11A1P12107 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COL11A1P12107 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.45■■□□□ 1.02
COL11A1P12107 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 PVRIG2P-201ENST00000435460 978 ntBASIC21.45■■□□□ 1.02
COL11A1P12107 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.45■■□□□ 1.02
COL11A1P12107 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.45■■□□□ 1.02
COL11A1P12107 RN7SL510P-201ENST00000581311 263 ntBASIC21.45■■□□□ 1.02
COL11A1P12107 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.45■■□□□ 1.02
COL11A1P12107 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A1P12107 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A1P12107 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.44■■□□□ 1.02
COL11A1P12107 AC034236.2-201ENST00000606662 1610 ntBASIC21.44■■□□□ 1.02
COL11A1P12107 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
COL11A1P12107 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 TSPY22P-201ENST00000427496 604 ntBASIC21.44■■□□□ 1.02
COL11A1P12107 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.44■■□□□ 1.02
COL11A1P12107 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.44■■□□□ 1.02
COL11A1P12107 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.44■■□□□ 1.02
COL11A1P12107 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.44■■□□□ 1.02
COL11A1P12107 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.44■■□□□ 1.02
COL11A1P12107 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A1P12107 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 AC246785.2-201ENST00000432512 513 ntBASIC21.43■■□□□ 1.02
COL11A1P12107 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A1P12107 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A1P12107 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.43■■□□□ 1.02
COL11A1P12107 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A1P12107 MIR662-201ENST00000384847 95 ntBASIC21.43■■□□□ 1.02
COL11A1P12107 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A1P12107 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.43■■□□□ 1.02
COL11A1P12107 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.43■■□□□ 1.02
COL11A1P12107 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A1P12107 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.43■■□□□ 1.02
COL11A1P12107 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.43■■□□□ 1.02
COL11A1P12107 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.42■■□□□ 1.02
COL11A1P12107 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A1P12107 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
COL11A1P12107 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 LINC00167-201ENST00000530583 1419 ntBASIC21.42■■□□□ 1.02
COL11A1P12107 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
COL11A1P12107 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A1P12107 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.42■■□□□ 1.02
COL11A1P12107 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.42■■□□□ 1.02
COL11A1P12107 DRAXINP1-201ENST00000437611 948 ntBASIC21.42■■□□□ 1.02
COL11A1P12107 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A1P12107 AP002414.4-201ENST00000589764 1148 ntBASIC21.42■■□□□ 1.02
COL11A1P12107 FEM1AP3-201ENST00000403722 1741 ntBASIC21.42■■□□□ 1.02
COL11A1P12107 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.42■■□□□ 1.02
COL11A1P12107 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 AC006333.2-201ENST00000607957 2099 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms