Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLUP10909 AC069152.1-201ENST00000438030 544 ntBASIC17.03■□□□□ 0.32
CLUP10909 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.03■□□□□ 0.32
CLUP10909 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.03■□□□□ 0.32
CLUP10909 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLUP10909 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLUP10909 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.03■□□□□ 0.32
CLUP10909 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
CLUP10909 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLUP10909 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLUP10909 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLUP10909 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.03■□□□□ 0.32
CLUP10909 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 AL133373.2-201ENST00000623187 2828 ntBASIC17.02■□□□□ 0.32
CLUP10909 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.02■□□□□ 0.32
CLUP10909 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.02■□□□□ 0.32
CLUP10909 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
CLUP10909 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 UNC93B4-201ENST00000505679 747 ntBASIC17.02■□□□□ 0.32
CLUP10909 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.02■□□□□ 0.32
CLUP10909 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.02■□□□□ 0.32
CLUP10909 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.02■□□□□ 0.32
CLUP10909 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.02■□□□□ 0.32
CLUP10909 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLUP10909 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
CLUP10909 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLUP10909 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
CLUP10909 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.02■□□□□ 0.31
CLUP10909 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLUP10909 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLUP10909 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLUP10909 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.01■□□□□ 0.31
CLUP10909 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLUP10909 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CLUP10909 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLUP10909 BICD1-207ENST00000551848 1962 ntBASIC17.01■□□□□ 0.31
CLUP10909 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.01■□□□□ 0.31
CLUP10909 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.01■□□□□ 0.31
CLUP10909 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CLUP10909 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.01■□□□□ 0.31
CLUP10909 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLUP10909 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.01■□□□□ 0.31
CLUP10909 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.01■□□□□ 0.31
CLUP10909 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 AC133041.1-202ENST00000642053 222 ntBASIC17.01■□□□□ 0.31
CLUP10909 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.01■□□□□ 0.31
CLUP10909 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLUP10909 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLUP10909 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.01■□□□□ 0.31
CLUP10909 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLUP10909 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLUP10909 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLUP10909 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLUP10909 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms