Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.91■□□□□ 0.62
THRAP10827 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
THRAP10827 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
THRAP10827 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.91■□□□□ 0.62
THRAP10827 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.91■□□□□ 0.62
THRAP10827 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 AC145285.6-201ENST00000604632 637 ntBASIC18.91■□□□□ 0.62
THRAP10827 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.91■□□□□ 0.62
THRAP10827 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
THRAP10827 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
THRAP10827 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
THRAP10827 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THRAP10827 AL161938.1-201ENST00000569833 2180 ntBASIC18.91■□□□□ 0.62
THRAP10827 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.9■□□□□ 0.62
THRAP10827 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
THRAP10827 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.9■□□□□ 0.62
THRAP10827 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.9■□□□□ 0.62
THRAP10827 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.9■□□□□ 0.62
THRAP10827 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.9■□□□□ 0.62
THRAP10827 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.9■□□□□ 0.62
THRAP10827 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.9■□□□□ 0.62
THRAP10827 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.9■□□□□ 0.62
THRAP10827 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.9■□□□□ 0.62
THRAP10827 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 KRT8P9-201ENST00000558927 1449 ntBASIC18.9■□□□□ 0.62
THRAP10827 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.9■□□□□ 0.62
THRAP10827 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THRAP10827 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
THRAP10827 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
THRAP10827 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
THRAP10827 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
THRAP10827 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
THRAP10827 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.89■□□□□ 0.61
THRAP10827 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 AC090340.1-201ENST00000620778 4980 ntBASIC18.89■□□□□ 0.61
THRAP10827 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.89■□□□□ 0.61
THRAP10827 MIR1238-201ENST00000408483 83 ntBASIC18.89■□□□□ 0.61
THRAP10827 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.89■□□□□ 0.61
THRAP10827 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.89■□□□□ 0.61
THRAP10827 KRT18P16-201ENST00000510337 1294 ntBASIC18.89■□□□□ 0.61
THRAP10827 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.89■□□□□ 0.61
THRAP10827 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.89■□□□□ 0.61
THRAP10827 MIR6786-201ENST00000616843 113 ntBASIC18.89■□□□□ 0.61
THRAP10827 AL445675.2-201ENST00000620291 557 ntBASIC18.89■□□□□ 0.61
THRAP10827 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
THRAP10827 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
THRAP10827 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
THRAP10827 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.89■□□□□ 0.61
THRAP10827 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.89■□□□□ 0.61
THRAP10827 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
THRAP10827 PHGDH-210ENST00000641115 1638 ntBASIC18.89■□□□□ 0.61
THRAP10827 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
THRAP10827 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 AC006333.2-201ENST00000607957 2099 ntBASIC18.88■□□□□ 0.61
THRAP10827 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
THRAP10827 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.88■□□□□ 0.61
THRAP10827 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
THRAP10827 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
THRAP10827 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.88■□□□□ 0.61
THRAP10827 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms