Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RETP07949 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.01■□□□□ 0.63
RETP07949 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 AL158211.5-201ENST00000623583 2518 ntBASIC19.01■□□□□ 0.63
RETP07949 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RETP07949 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19■□□□□ 0.63
RETP07949 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RETP07949 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RETP07949 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19■□□□□ 0.63
RETP07949 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RETP07949 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19■□□□□ 0.63
RETP07949 AC034232.1-201ENST00000506026 1064 ntBASIC19■□□□□ 0.63
RETP07949 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19■□□□□ 0.63
RETP07949 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19■□□□□ 0.63
RETP07949 AL160237.2-201ENST00000556165 472 ntBASIC19■□□□□ 0.63
RETP07949 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
RETP07949 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RETP07949 BX119927.1-201ENST00000636596 1552 ntBASIC19■□□□□ 0.63
RETP07949 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19■□□□□ 0.63
RETP07949 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RETP07949 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19■□□□□ 0.63
RETP07949 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RETP07949 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
RETP07949 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RETP07949 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.99■□□□□ 0.63
RETP07949 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RETP07949 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.99■□□□□ 0.63
RETP07949 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.99■□□□□ 0.63
RETP07949 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RETP07949 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
RETP07949 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RETP07949 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.99■□□□□ 0.63
RETP07949 EMBP1-201ENST00000458200 901 ntBASIC18.99■□□□□ 0.63
RETP07949 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RETP07949 AC104692.2-201ENST00000603054 253 ntBASIC18.99■□□□□ 0.63
RETP07949 AL031008.1-201ENST00000619963 541 ntBASIC18.99■□□□□ 0.63
RETP07949 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.99■□□□□ 0.63
RETP07949 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.99■□□□□ 0.63
RETP07949 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RETP07949 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RETP07949 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.98■□□□□ 0.63
RETP07949 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RETP07949 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.98■□□□□ 0.63
RETP07949 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 AP002383.4-201ENST00000442518 975 ntBASIC18.98■□□□□ 0.63
RETP07949 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.98■□□□□ 0.63
RETP07949 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RETP07949 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.98■□□□□ 0.63
RETP07949 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.98■□□□□ 0.63
RETP07949 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.98■□□□□ 0.63
RETP07949 AL020996.1-203ENST00000536896 2307 ntBASIC18.98■□□□□ 0.63
RETP07949 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RETP07949 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
RETP07949 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RETP07949 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RETP07949 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.97■□□□□ 0.63
RETP07949 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RETP07949 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.97■□□□□ 0.63
RETP07949 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.97■□□□□ 0.63
RETP07949 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RETP07949 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.97■□□□□ 0.63
RETP07949 RASA4DP-201ENST00000460726 1199 ntBASIC18.97■□□□□ 0.63
RETP07949 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms