Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CAPN1P07384 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN1P07384 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.56■□□□□ 0.56
CAPN1P07384 RBM17P1-201ENST00000453646 1190 ntBASIC18.56■□□□□ 0.56
CAPN1P07384 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN1P07384 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CAPN1P07384 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN1P07384 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.56■□□□□ 0.56
CAPN1P07384 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN1P07384 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CAPN1P07384 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
CAPN1P07384 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.55■□□□□ 0.56
CAPN1P07384 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 AC079598.2-202ENST00000546624 1451 ntBASIC18.55■□□□□ 0.56
CAPN1P07384 MMP23A-201ENST00000234610 1017 ntBASIC18.55■□□□□ 0.56
CAPN1P07384 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 AC116562.2-201ENST00000507042 360 ntBASIC18.55■□□□□ 0.56
CAPN1P07384 C1QL1P1-201ENST00000568105 661 ntBASIC18.55■□□□□ 0.56
CAPN1P07384 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.55■□□□□ 0.56
CAPN1P07384 CR392000.1-201ENST00000624770 1228 ntBASIC18.55■□□□□ 0.56
CAPN1P07384 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN1P07384 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN1P07384 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CAPN1P07384 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN1P07384 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN1P07384 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN1P07384 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CAPN1P07384 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN1P07384 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN1P07384 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN1P07384 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.54■□□□□ 0.56
CAPN1P07384 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN1P07384 FEM1AP3-201ENST00000403722 1741 ntBASIC18.54■□□□□ 0.56
CAPN1P07384 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN1P07384 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN1P07384 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN1P07384 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN1P07384 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CAPN1P07384 KRT16P1-201ENST00000399124 1418 ntBASIC18.53■□□□□ 0.56
CAPN1P07384 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CAPN1P07384 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CAPN1P07384 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms