Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MT-ND1P03886 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
MT-ND1P03886 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND1P03886 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND1P03886 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND1P03886 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND1P03886 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.79■□□□□ 0.44
MT-ND1P03886 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.79■□□□□ 0.44
MT-ND1P03886 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 AC091874.3-201ENST00000512672 1195 ntBASIC17.79■□□□□ 0.44
MT-ND1P03886 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
MT-ND1P03886 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-ND1P03886 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MT-ND1P03886 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-ND1P03886 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MT-ND1P03886 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
MT-ND1P03886 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND1P03886 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
MT-ND1P03886 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 SLC29A4P1-201ENST00000398760 971 ntBASIC17.78■□□□□ 0.44
MT-ND1P03886 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.78■□□□□ 0.44
MT-ND1P03886 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.78■□□□□ 0.44
MT-ND1P03886 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 AC083906.6-201ENST00000641366 219 ntBASIC17.78■□□□□ 0.44
MT-ND1P03886 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MT-ND1P03886 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-ND1P03886 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-ND1P03886 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MT-ND1P03886 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND1P03886 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MT-ND1P03886 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MT-ND1P03886 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-ND1P03886 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 NCF1B-203ENST00000435988 1254 ntBASIC17.77■□□□□ 0.44
MT-ND1P03886 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND1P03886 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MT-ND1P03886 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms