Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.5■■□□□ 1.03
ALDH1A1P00352 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 AL355385.1-201ENST00000606123 409 ntBASIC21.5■■□□□ 1.03
ALDH1A1P00352 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 AL353692.3-201ENST00000407031 1396 ntBASIC21.49■■□□□ 1.03
ALDH1A1P00352 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.49■■□□□ 1.03
ALDH1A1P00352 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 AL139424.1-201ENST00000607572 797 ntBASIC21.49■■□□□ 1.03
ALDH1A1P00352 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 KRT89P-201ENST00000620027 1478 ntBASIC21.49■■□□□ 1.03
ALDH1A1P00352 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ALDH1A1P00352 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.49■■□□□ 1.03
ALDH1A1P00352 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 SDHAP1-207ENST00000440850 2000 ntBASIC21.48■■□□□ 1.03
ALDH1A1P00352 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 SCARNA2-201ENST00000458748 420 ntBASIC21.48■■□□□ 1.03
ALDH1A1P00352 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 AC091607.1-201ENST00000490318 1060 ntBASIC21.48■■□□□ 1.03
ALDH1A1P00352 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 LINC02084-201ENST00000606069 1096 ntBASIC21.48■■□□□ 1.03
ALDH1A1P00352 MIR7706-201ENST00000613747 67 ntBASIC21.48■■□□□ 1.03
ALDH1A1P00352 AC020907.5-201ENST00000624372 1936 ntBASIC21.48■■□□□ 1.03
ALDH1A1P00352 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ALDH1A1P00352 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ALDH1A1P00352 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 PMS2P2-201ENST00000425039 1128 ntBASIC21.47■■□□□ 1.03
ALDH1A1P00352 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 BNIP3P18-201ENST00000593976 575 ntBASIC21.47■■□□□ 1.03
ALDH1A1P00352 AC140113.2-201ENST00000604370 208 ntBASIC21.47■■□□□ 1.03
ALDH1A1P00352 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms