Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRUB2O95900 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.76■□□□□ 0.75
TRUB2O95900 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.76■□□□□ 0.75
TRUB2O95900 AL512353.2-201ENST00000448759 1962 ntBASIC19.76■□□□□ 0.75
TRUB2O95900 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.76■□□□□ 0.75
TRUB2O95900 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 SLC25A1P2-201ENST00000430693 912 ntBASIC19.76■□□□□ 0.75
TRUB2O95900 EGLN1P1-201ENST00000531623 762 ntBASIC19.76■□□□□ 0.75
TRUB2O95900 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRUB2O95900 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.76■□□□□ 0.75
TRUB2O95900 AC083906.6-201ENST00000641366 219 ntBASIC19.76■□□□□ 0.75
TRUB2O95900 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
TRUB2O95900 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.76■□□□□ 0.75
TRUB2O95900 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRUB2O95900 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB2O95900 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
TRUB2O95900 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.75■□□□□ 0.75
TRUB2O95900 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
TRUB2O95900 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 AC211429.1-201ENST00000415277 523 ntBASIC19.75■□□□□ 0.75
TRUB2O95900 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.75■□□□□ 0.75
TRUB2O95900 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 AL023803.3-201ENST00000615559 522 ntBASIC19.75■□□□□ 0.75
TRUB2O95900 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.75■□□□□ 0.75
TRUB2O95900 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRUB2O95900 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB2O95900 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB2O95900 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TRUB2O95900 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
TRUB2O95900 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRUB2O95900 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.74■□□□□ 0.75
TRUB2O95900 LINC01568-207ENST00000641790 1380 ntBASIC19.74■□□□□ 0.75
TRUB2O95900 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.74■□□□□ 0.75
TRUB2O95900 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.74■□□□□ 0.75
TRUB2O95900 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.74■□□□□ 0.75
TRUB2O95900 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.74■□□□□ 0.75
TRUB2O95900 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRUB2O95900 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.74■□□□□ 0.75
TRUB2O95900 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.74■□□□□ 0.75
TRUB2O95900 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.74■□□□□ 0.75
TRUB2O95900 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.74■□□□□ 0.75
TRUB2O95900 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB2O95900 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 Z98044.1-201ENST00000632503 1764 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRUB2O95900 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms