Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF3O95398 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF3O95398 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF3O95398 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF3O95398 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 URGCP-206ENST00000446958 365 ntTSL 2 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF3O95398 AL109659.2-201ENST00000606809 1674 ntBASIC28.28■■■□□ 2.12
RAPGEF3O95398 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
RAPGEF3O95398 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 GPX1P2-201ENST00000429271 606 ntBASIC28.27■■■□□ 2.12
RAPGEF3O95398 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC28.27■■■□□ 2.12
RAPGEF3O95398 AC079834.2-201ENST00000609776 1949 ntBASIC28.27■■■□□ 2.12
RAPGEF3O95398 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF3O95398 DET1-207ENST00000564406 2315 ntTSL 2 BASIC28.26■■■□□ 2.12
RAPGEF3O95398 AL353692.3-201ENST00000407031 1396 ntBASIC28.26■■■□□ 2.12
RAPGEF3O95398 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
RAPGEF3O95398 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
RAPGEF3O95398 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF3O95398 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF3O95398 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF3O95398 RPS8P6-201ENST00000426177 609 ntBASIC28.26■■■□□ 2.11
RAPGEF3O95398 SCARNA2-201ENST00000458748 420 ntBASIC28.26■■■□□ 2.11
RAPGEF3O95398 AC145285.3-201ENST00000564603 959 ntBASIC28.26■■■□□ 2.11
RAPGEF3O95398 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF3O95398 AL356488.2-201ENST00000602755 427 ntBASIC28.26■■■□□ 2.11
RAPGEF3O95398 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF3O95398 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC28.26■■■□□ 2.11
RAPGEF3O95398 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
RAPGEF3O95398 AC104109.2-201ENST00000602919 1418 ntBASIC28.26■■■□□ 2.11
RAPGEF3O95398 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC28.25■■■□□ 2.11
RAPGEF3O95398 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 CSF3-203ENST00000394148 622 ntTSL 3 BASIC28.25■■■□□ 2.11
RAPGEF3O95398 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 FGFR3P6-201ENST00000457012 610 ntBASIC28.25■■■□□ 2.11
RAPGEF3O95398 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 IGHV3-22-201ENST00000520721 359 ntBASIC28.25■■■□□ 2.11
RAPGEF3O95398 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC28.25■■■□□ 2.11
RAPGEF3O95398 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC28.25■■■□□ 2.11
RAPGEF3O95398 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF3O95398 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RAPGEF3O95398 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 FIS1-203ENST00000442303 631 ntTSL 3 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 NMU-202ENST00000505262 693 ntTSL 3 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 PPOX-214ENST00000535223 664 ntTSL 3 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 AC011840.4-201ENST00000578471 627 ntBASIC28.24■■■□□ 2.11
RAPGEF3O95398 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RAPGEF3O95398 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC28.24■■■□□ 2.11
RAPGEF3O95398 AC020907.5-201ENST00000624372 1936 ntBASIC28.24■■■□□ 2.11
RAPGEF3O95398 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF3O95398 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 AC024563.2-201ENST00000603282 481 ntBASIC28.23■■■□□ 2.11
RAPGEF3O95398 AC114341.1-201ENST00000618070 349 ntBASIC28.23■■■□□ 2.11
RAPGEF3O95398 AL355877.3-201ENST00000622820 899 ntBASIC28.23■■■□□ 2.11
RAPGEF3O95398 CAND2-206ENST00000626378 333 ntTSL 5 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC28.23■■■□□ 2.11
RAPGEF3O95398 RCC2P3-201ENST00000418112 1537 ntBASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms