Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC073195.1-201ENST00000607241 877 ntBASIC18.97■□□□□ 0.63
VAPBO95292 AL031985.4-201ENST00000642138 673 ntBASIC18.97■□□□□ 0.63
VAPBO95292 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VAPBO95292 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.96■□□□□ 0.63
VAPBO95292 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
VAPBO95292 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VAPBO95292 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.96■□□□□ 0.63
VAPBO95292 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VAPBO95292 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VAPBO95292 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
VAPBO95292 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.95■□□□□ 0.62
VAPBO95292 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
VAPBO95292 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.95■□□□□ 0.62
VAPBO95292 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.95■□□□□ 0.62
VAPBO95292 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VAPBO95292 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 PRSS44-201ENST00000515154 1146 ntBASIC18.95■□□□□ 0.62
VAPBO95292 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 AC142381.4-202ENST00000563973 229 ntBASIC18.95■□□□□ 0.62
VAPBO95292 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.95■□□□□ 0.62
VAPBO95292 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.95■□□□□ 0.62
VAPBO95292 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 AC009113.1-201ENST00000570267 2443 ntBASIC18.95■□□□□ 0.62
VAPBO95292 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.95■□□□□ 0.62
VAPBO95292 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VAPBO95292 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.95■□□□□ 0.62
VAPBO95292 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.94■□□□□ 0.62
VAPBO95292 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VAPBO95292 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 ANO7L1-203ENST00000602586 1720 ntBASIC18.94■□□□□ 0.62
VAPBO95292 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VAPBO95292 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
VAPBO95292 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 AC008040.2-201ENST00000461049 708 ntBASIC18.94■□□□□ 0.62
VAPBO95292 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.94■□□□□ 0.62
VAPBO95292 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.94■□□□□ 0.62
VAPBO95292 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.94■□□□□ 0.62
VAPBO95292 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.94■□□□□ 0.62
VAPBO95292 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.94■□□□□ 0.62
VAPBO95292 AC026271.3-201ENST00000571884 352 ntBASIC18.94■□□□□ 0.62
VAPBO95292 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.94■□□□□ 0.62
VAPBO95292 AC011298.2-201ENST00000617989 482 ntBASIC18.94■□□□□ 0.62
VAPBO95292 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.94■□□□□ 0.62
VAPBO95292 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VAPBO95292 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VAPBO95292 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VAPBO95292 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.94■□□□□ 0.62
VAPBO95292 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms