Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN3O95197 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 AC141586.3-201ENST00000562166 1838 ntBASIC19.86■□□□□ 0.77
RTN3O95197 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN3O95197 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 BX323043.1-201ENST00000641006 1765 ntBASIC19.86■□□□□ 0.77
RTN3O95197 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 FEM1AP3-201ENST00000403722 1741 ntBASIC19.86■□□□□ 0.77
RTN3O95197 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.86■□□□□ 0.77
RTN3O95197 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.86■□□□□ 0.77
RTN3O95197 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN3O95197 AC008622.2-201ENST00000617006 1229 ntBASIC19.86■□□□□ 0.77
RTN3O95197 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTN3O95197 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RTN3O95197 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN3O95197 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN3O95197 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.85■□□□□ 0.77
RTN3O95197 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.85■□□□□ 0.77
RTN3O95197 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN3O95197 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTN3O95197 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.85■□□□□ 0.77
RTN3O95197 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 AP000523.1-201ENST00000398242 1049 ntBASIC19.85■□□□□ 0.77
RTN3O95197 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN3O95197 AC117947.1-201ENST00000427448 529 ntBASIC19.85■□□□□ 0.77
RTN3O95197 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN3O95197 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.85■□□□□ 0.77
RTN3O95197 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN3O95197 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.85■□□□□ 0.77
RTN3O95197 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN3O95197 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RTN3O95197 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.84■□□□□ 0.77
RTN3O95197 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RTN3O95197 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTN3O95197 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.84■□□□□ 0.77
RTN3O95197 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN3O95197 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 MIR4674-201ENST00000582457 87 ntBASIC19.84■□□□□ 0.77
RTN3O95197 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN3O95197 AC139887.4-201ENST00000607877 719 ntBASIC19.84■□□□□ 0.77
RTN3O95197 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RTN3O95197 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN3O95197 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN3O95197 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN3O95197 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.83■□□□□ 0.77
RTN3O95197 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN3O95197 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTN3O95197 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTN3O95197 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.83■□□□□ 0.77
RTN3O95197 RNF152P1-201ENST00000397754 604 ntBASIC19.83■□□□□ 0.77
RTN3O95197 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RTN3O95197 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.83■□□□□ 0.77
RTN3O95197 YBX1P2-201ENST00000489612 999 ntBASIC19.83■□□□□ 0.77
RTN3O95197 LINC01238-205ENST00000567549 1107 ntBASIC19.83■□□□□ 0.77
RTN3O95197 NEK4P2-201ENST00000580004 1012 ntBASIC19.83■□□□□ 0.77
RTN3O95197 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN3O95197 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTN3O95197 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN3O95197 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.83■□□□□ 0.76
RTN3O95197 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTN3O95197 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN3O95197 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTN3O95197 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN3O95197 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
RTN3O95197 FP475955.4-201ENST00000623131 1990 ntBASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms