Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.94■■□□□ 1.1
CDKL5O76039 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKL5O76039 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKL5O76039 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.94■■□□□ 1.1
CDKL5O76039 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.93■■□□□ 1.1
CDKL5O76039 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.93■■□□□ 1.1
CDKL5O76039 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.93■■□□□ 1.1
CDKL5O76039 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.93■■□□□ 1.1
CDKL5O76039 AP003071.4-201ENST00000562276 1284 ntBASIC21.93■■□□□ 1.1
CDKL5O76039 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.93■■□□□ 1.1
CDKL5O76039 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.93■■□□□ 1.1
CDKL5O76039 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.93■■□□□ 1.1
CDKL5O76039 AC068587.9-201ENST00000641814 219 ntBASIC21.93■■□□□ 1.1
CDKL5O76039 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKL5O76039 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKL5O76039 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CDKL5O76039 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKL5O76039 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKL5O76039 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKL5O76039 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKL5O76039 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDKL5O76039 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKL5O76039 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKL5O76039 ANO7L1-203ENST00000602586 1720 ntBASIC21.92■■□□□ 1.1
CDKL5O76039 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKL5O76039 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL5O76039 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKL5O76039 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
CDKL5O76039 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CDKL5O76039 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKL5O76039 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL5O76039 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL5O76039 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL5O76039 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.91■■□□□ 1.1
CDKL5O76039 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKL5O76039 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDKL5O76039 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKL5O76039 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDKL5O76039 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKL5O76039 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL5O76039 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKL5O76039 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.9■■□□□ 1.1
CDKL5O76039 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL5O76039 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.9■■□□□ 1.1
CDKL5O76039 AP005242.2-201ENST00000580065 1175 ntBASIC21.9■■□□□ 1.1
CDKL5O76039 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKL5O76039 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKL5O76039 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKL5O76039 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDKL5O76039 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.89■■□□□ 1.1
CDKL5O76039 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.89■■□□□ 1.1
CDKL5O76039 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.89■■□□□ 1.1
CDKL5O76039 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.89■■□□□ 1.1
CDKL5O76039 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL5O76039 UNC93B2-201ENST00000285383 730 ntBASIC21.89■■□□□ 1.09
CDKL5O76039 CRYGFP-201ENST00000418459 633 ntBASIC21.89■■□□□ 1.09
CDKL5O76039 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms