Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM3O75382 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM3O75382 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRIM3O75382 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM3O75382 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM3O75382 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM3O75382 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM3O75382 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM3O75382 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM3O75382 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM3O75382 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM3O75382 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM3O75382 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM3O75382 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.58■□□□□ 0.4
TRIM3O75382 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM3O75382 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRIM3O75382 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM3O75382 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 AL390955.1-201ENST00000428694 934 ntBASIC17.57■□□□□ 0.4
TRIM3O75382 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 AP005242.2-201ENST00000580065 1175 ntBASIC17.57■□□□□ 0.4
TRIM3O75382 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 AC012306.2-201ENST00000609350 630 ntBASIC17.57■□□□□ 0.4
TRIM3O75382 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM3O75382 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM3O75382 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM3O75382 KRT8P41-201ENST00000533985 1514 ntBASIC17.57■□□□□ 0.4
TRIM3O75382 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM3O75382 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM3O75382 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM3O75382 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 KRT8P9-201ENST00000558927 1449 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 AC104417.2-201ENST00000562989 1793 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 ZNF815P-204ENST00000434898 1737 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM3O75382 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM3O75382 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 ECEL1P3-201ENST00000427961 737 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 FAM207BP-201ENST00000447172 505 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM3O75382 AC097488.1-201ENST00000507834 756 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM3O75382 LINC01023-201ENST00000606054 436 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 AC133561.5-201ENST00000635547 218 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 AC097493.4-201ENST00000641197 219 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM3O75382 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM3O75382 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM3O75382 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM3O75382 AC120498.9-201ENST00000339021 3867 ntBASIC17.56■□□□□ 0.4
TRIM3O75382 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms