Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.01■□□□□ 0.31
PTP4A3O75365 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A3O75365 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTP4A3O75365 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTP4A3O75365 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A3O75365 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A3O75365 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A3O75365 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A3O75365 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A3O75365 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTP4A3O75365 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTP4A3O75365 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 NIFKP9-201ENST00000419265 221 ntBASIC17■□□□□ 0.31
PTP4A3O75365 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A3O75365 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTP4A3O75365 KRT8P3-201ENST00000519669 1449 ntBASIC17■□□□□ 0.31
PTP4A3O75365 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17■□□□□ 0.31
PTP4A3O75365 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17■□□□□ 0.31
PTP4A3O75365 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17■□□□□ 0.31
PTP4A3O75365 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17■□□□□ 0.31
PTP4A3O75365 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17■□□□□ 0.31
PTP4A3O75365 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTP4A3O75365 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PTP4A3O75365 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A3O75365 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A3O75365 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.99■□□□□ 0.31
PTP4A3O75365 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.99■□□□□ 0.31
PTP4A3O75365 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.99■□□□□ 0.31
PTP4A3O75365 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 PRSS44-201ENST00000515154 1146 ntBASIC16.99■□□□□ 0.31
PTP4A3O75365 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 AL353708.3-201ENST00000610272 989 ntBASIC16.99■□□□□ 0.31
PTP4A3O75365 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.99■□□□□ 0.31
PTP4A3O75365 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
PTP4A3O75365 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PTP4A3O75365 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A3O75365 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A3O75365 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.98■□□□□ 0.31
PTP4A3O75365 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 RPS2P4-201ENST00000476944 856 ntBASIC16.98■□□□□ 0.31
PTP4A3O75365 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.98■□□□□ 0.31
PTP4A3O75365 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.98■□□□□ 0.31
PTP4A3O75365 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.98■□□□□ 0.31
PTP4A3O75365 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.98■□□□□ 0.31
PTP4A3O75365 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A3O75365 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTP4A3O75365 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTP4A3O75365 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTP4A3O75365 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.97■□□□□ 0.31
PTP4A3O75365 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.97■□□□□ 0.31
PTP4A3O75365 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTP4A3O75365 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTP4A3O75365 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms