Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF40O75150 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF40O75150 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF40O75150 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF40O75150 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF40O75150 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF40O75150 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RNF40O75150 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
RNF40O75150 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF40O75150 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF40O75150 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF40O75150 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF40O75150 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RNF40O75150 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF40O75150 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF40O75150 AL445228.2-201ENST00000605589 952 ntBASIC20.32■□□□□ 0.84
RNF40O75150 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF40O75150 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF40O75150 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF40O75150 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF40O75150 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF40O75150 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF40O75150 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF40O75150 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF40O75150 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 AP000525.1-201ENST00000608286 694 ntBASIC20.31■□□□□ 0.84
RNF40O75150 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 REXO1L10P-201ENST00000615707 1290 ntBASIC20.31■□□□□ 0.84
RNF40O75150 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF40O75150 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF40O75150 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF40O75150 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RNF40O75150 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF40O75150 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF40O75150 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF40O75150 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 UNC93B2-201ENST00000285383 730 ntBASIC20.3■□□□□ 0.84
RNF40O75150 HLA-G-202ENST00000376815 851 ntBASIC20.3■□□□□ 0.84
RNF40O75150 HLA-G-203ENST00000376818 1127 ntBASIC20.3■□□□□ 0.84
RNF40O75150 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF40O75150 AC145285.6-201ENST00000604632 637 ntBASIC20.3■□□□□ 0.84
RNF40O75150 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RNF40O75150 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF40O75150 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF40O75150 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF40O75150 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF40O75150 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 NOC2LP2-201ENST00000407594 1944 ntBASIC20.29■□□□□ 0.84
RNF40O75150 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF40O75150 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF40O75150 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 KRT8P9-201ENST00000558927 1449 ntBASIC20.29■□□□□ 0.84
RNF40O75150 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RNF40O75150 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF40O75150 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF40O75150 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms