Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
KLHL41O60662 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 SNORA78-201ENST00000459373 127 ntBASIC18.72■□□□□ 0.59
KLHL41O60662 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 AC233263.1-201ENST00000578059 224 ntBASIC18.72■□□□□ 0.59
KLHL41O60662 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.72■□□□□ 0.59
KLHL41O60662 AC124016.1-201ENST00000609552 612 ntBASIC18.72■□□□□ 0.59
KLHL41O60662 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.72■□□□□ 0.59
KLHL41O60662 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.72■□□□□ 0.59
KLHL41O60662 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.72■□□□□ 0.59
KLHL41O60662 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KLHL41O60662 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.71■□□□□ 0.59
KLHL41O60662 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 IRX1P1-201ENST00000438849 1838 ntBASIC18.71■□□□□ 0.59
KLHL41O60662 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 PCDHB18P-201ENST00000524813 2368 ntBASIC18.71■□□□□ 0.59
KLHL41O60662 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.71■□□□□ 0.59
KLHL41O60662 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
KLHL41O60662 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KLHL41O60662 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.71■□□□□ 0.59
KLHL41O60662 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KLHL41O60662 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
KLHL41O60662 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 BICD1-207ENST00000551848 1962 ntBASIC18.7■□□□□ 0.58
KLHL41O60662 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
KLHL41O60662 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KLHL41O60662 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.7■□□□□ 0.58
KLHL41O60662 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 RARRES2P10-201ENST00000564312 460 ntBASIC18.7■□□□□ 0.58
KLHL41O60662 MIR4785-201ENST00000585005 73 ntBASIC18.7■□□□□ 0.58
KLHL41O60662 REXO1L12P-201ENST00000622156 912 ntBASIC18.7■□□□□ 0.58
KLHL41O60662 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KLHL41O60662 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHL41O60662 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHL41O60662 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHL41O60662 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL41O60662 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.69■□□□□ 0.58
KLHL41O60662 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL41O60662 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL41O60662 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
KLHL41O60662 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL41O60662 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KLHL41O60662 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KLHL41O60662 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHL41O60662 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms