Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.42■■□□□ 1.02
CCNT1O60563 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.42■■□□□ 1.02
CCNT1O60563 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 AL353719.1-201ENST00000566847 864 ntBASIC21.42■■□□□ 1.02
CCNT1O60563 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CCNT1O60563 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.42■■□□□ 1.02
CCNT1O60563 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNT1O60563 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 TNXA-203ENST00000507684 2038 ntBASIC21.41■■□□□ 1.02
CCNT1O60563 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNT1O60563 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCNT1O60563 KRT8P32-201ENST00000512863 1461 ntBASIC21.41■■□□□ 1.02
CCNT1O60563 AC092338.2-201ENST00000568827 1415 ntBASIC21.41■■□□□ 1.02
CCNT1O60563 LINC01568-207ENST00000641790 1380 ntBASIC21.41■■□□□ 1.02
CCNT1O60563 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNT1O60563 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNT1O60563 AP003041.3-201ENST00000527151 707 ntBASIC21.41■■□□□ 1.02
CCNT1O60563 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.41■■□□□ 1.02
CCNT1O60563 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNT1O60563 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNT1O60563 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
CCNT1O60563 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNT1O60563 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNT1O60563 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNT1O60563 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNT1O60563 RCC2P3-201ENST00000418112 1537 ntBASIC21.4■■□□□ 1.02
CCNT1O60563 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNT1O60563 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNT1O60563 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCNT1O60563 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNT1O60563 AC007663.1-201ENST00000438948 1240 ntBASIC21.4■■□□□ 1.02
CCNT1O60563 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNT1O60563 AC133561.5-201ENST00000635547 218 ntBASIC21.4■■□□□ 1.02
CCNT1O60563 AC083906.6-201ENST00000641366 219 ntBASIC21.4■■□□□ 1.02
CCNT1O60563 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNT1O60563 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNT1O60563 GPAT2P1-201ENST00000444924 1672 ntBASIC21.4■■□□□ 1.02
CCNT1O60563 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNT1O60563 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNT1O60563 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNT1O60563 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNT1O60563 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNT1O60563 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.39■■□□□ 1.01
CCNT1O60563 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
CCNT1O60563 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCNT1O60563 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 ECEL1P2-202ENST00000465689 757 ntBASIC21.39■■□□□ 1.01
CCNT1O60563 AC128688.1-201ENST00000487626 519 ntBASIC21.39■■□□□ 1.01
CCNT1O60563 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNT1O60563 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.39■■□□□ 1.01
CCNT1O60563 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNT1O60563 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCNT1O60563 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNT1O60563 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCNT1O60563 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CCNT1O60563 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCNT1O60563 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNT1O60563 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCNT1O60563 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.38■■□□□ 1.01
CCNT1O60563 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNT1O60563 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CCNT1O60563 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNT1O60563 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCNT1O60563 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.38■■□□□ 1.01
CCNT1O60563 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNT1O60563 AC068587.9-201ENST00000641814 219 ntBASIC21.38■■□□□ 1.01
CCNT1O60563 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNT1O60563 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
CCNT1O60563 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCNT1O60563 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNT1O60563 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNT1O60563 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNT1O60563 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNT1O60563 HEIH-201ENST00000623091 1652 ntBASIC21.37■■□□□ 1.01
CCNT1O60563 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms