Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TO15178 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
TO15178 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 HEIH-201ENST00000623091 1652 ntBASIC17.36■□□□□ 0.37
TO15178 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TO15178 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.36■□□□□ 0.37
TO15178 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 INGX-201ENST00000359239 846 ntBASIC17.36■□□□□ 0.37
TO15178 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.36■□□□□ 0.37
TO15178 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.36■□□□□ 0.37
TO15178 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.36■□□□□ 0.37
TO15178 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.36■□□□□ 0.37
TO15178 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TO15178 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 FAM87A-204ENST00000613235 858 ntBASIC17.36■□□□□ 0.37
TO15178 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TO15178 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.36■□□□□ 0.37
TO15178 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TO15178 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.36■□□□□ 0.37
TO15178 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.36■□□□□ 0.37
TO15178 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TO15178 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.36■□□□□ 0.37
TO15178 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.36■□□□□ 0.37
TO15178 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.36■□□□□ 0.37
TO15178 RCC2P3-201ENST00000418112 1537 ntBASIC17.36■□□□□ 0.37
TO15178 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
TO15178 GPAT2P1-201ENST00000444924 1672 ntBASIC17.36■□□□□ 0.37
TO15178 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.35■□□□□ 0.37
TO15178 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TO15178 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
TO15178 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.35■□□□□ 0.37
TO15178 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.35■□□□□ 0.37
TO15178 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 MIR4674-201ENST00000582457 87 ntBASIC17.35■□□□□ 0.37
TO15178 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.35■□□□□ 0.37
TO15178 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.35■□□□□ 0.37
TO15178 AC133561.5-201ENST00000635547 218 ntBASIC17.35■□□□□ 0.37
TO15178 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.35■□□□□ 0.37
TO15178 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TO15178 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TO15178 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TO15178 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.35■□□□□ 0.37
TO15178 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TO15178 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TO15178 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.34■□□□□ 0.37
TO15178 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
TO15178 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.34■□□□□ 0.37
TO15178 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 HMGA1P5-201ENST00000412453 271 ntBASIC17.34■□□□□ 0.37
TO15178 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.34■□□□□ 0.37
TO15178 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.34■□□□□ 0.37
TO15178 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.34■□□□□ 0.37
TO15178 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 MCCD1P1-208ENST00000445732 328 ntBASIC17.34■□□□□ 0.37
TO15178 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TO15178 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TO15178 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.34■□□□□ 0.37
TO15178 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.34■□□□□ 0.37
TO15178 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.34■□□□□ 0.37
TO15178 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.34■□□□□ 0.37
TO15178 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
TO15178 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TO15178 AC093525.10-201ENST00000625130 1569 ntBASIC17.34■□□□□ 0.37
TO15178 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms