Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1AO00555 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA1AO00555 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.75■□□□□ 0.43
CACNA1AO00555 OR7E14P-202ENST00000530490 1290 ntBASIC17.75■□□□□ 0.43
CACNA1AO00555 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.75■□□□□ 0.43
CACNA1AO00555 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA1AO00555 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.75■□□□□ 0.43
CACNA1AO00555 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA1AO00555 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1AO00555 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1AO00555 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1AO00555 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.75■□□□□ 0.43
CACNA1AO00555 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1AO00555 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1AO00555 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1AO00555 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1AO00555 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1AO00555 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1AO00555 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1AO00555 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1AO00555 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1AO00555 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 C1orf229-201ENST00000623686 2258 ntBASIC17.74■□□□□ 0.43
CACNA1AO00555 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1AO00555 HEIH-201ENST00000623091 1652 ntBASIC17.74■□□□□ 0.43
CACNA1AO00555 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1AO00555 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1AO00555 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1AO00555 MKNK2P1-201ENST00000437526 628 ntBASIC17.74■□□□□ 0.43
CACNA1AO00555 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1AO00555 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1AO00555 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1AO00555 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1AO00555 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1AO00555 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1AO00555 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1AO00555 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.73■□□□□ 0.43
CACNA1AO00555 DPP3P2-201ENST00000416030 1696 ntBASIC17.73■□□□□ 0.43
CACNA1AO00555 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1AO00555 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1AO00555 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1AO00555 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1AO00555 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1AO00555 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1AO00555 HOXB1-202ENST00000577092 1414 ntBASIC17.73■□□□□ 0.43
CACNA1AO00555 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CACNA1AO00555 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.72■□□□□ 0.43
CACNA1AO00555 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CACNA1AO00555 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CACNA1AO00555 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.72■□□□□ 0.43
CACNA1AO00555 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1AO00555 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1AO00555 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA1AO00555 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1AO00555 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNA1AO00555 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1AO00555 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.71■□□□□ 0.43
CACNA1AO00555 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1AO00555 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA1AO00555 AC105339.3-201ENST00000560043 636 ntBASIC17.71■□□□□ 0.43
CACNA1AO00555 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.71■□□□□ 0.43
CACNA1AO00555 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1AO00555 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1AO00555 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CACNA1AO00555 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1AO00555 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA1AO00555 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1AO00555 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1AO00555 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1AO00555 AC092910.1-201ENST00000482027 1129 ntBASIC17.71■□□□□ 0.43
CACNA1AO00555 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNA1AO00555 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.71■□□□□ 0.43
CACNA1AO00555 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNA1AO00555 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms