Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
FOXN3O00409 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN3O00409 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN3O00409 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXN3O00409 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN3O00409 TMEM191A-211ENST00000637163 1067 ntBASIC20.2■□□□□ 0.82
FOXN3O00409 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXN3O00409 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.2■□□□□ 0.82
FOXN3O00409 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN3O00409 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN3O00409 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN3O00409 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN3O00409 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
FOXN3O00409 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN3O00409 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN3O00409 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXN3O00409 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
FOXN3O00409 AP001412.1-201ENST00000608405 714 ntBASIC20.19■□□□□ 0.82
FOXN3O00409 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
FOXN3O00409 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
FOXN3O00409 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN3O00409 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN3O00409 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN3O00409 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN3O00409 AIRN-201ENST00000601203 4374 ntBASIC20.18■□□□□ 0.82
FOXN3O00409 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXN3O00409 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXN3O00409 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN3O00409 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
FOXN3O00409 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN3O00409 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN3O00409 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN3O00409 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN3O00409 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXN3O00409 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN3O00409 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
FOXN3O00409 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN3O00409 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN3O00409 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXN3O00409 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXN3O00409 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXN3O00409 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXN3O00409 REXO1L10P-201ENST00000615707 1290 ntBASIC20.17■□□□□ 0.82
FOXN3O00409 REXO1L12P-201ENST00000622156 912 ntBASIC20.17■□□□□ 0.82
FOXN3O00409 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN3O00409 AC090164.3-201ENST00000610780 2143 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms