Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC188H7C350 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC188H7C350 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC188H7C350 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 MIR663A-201ENST00000385250 93 ntBASIC19.62■□□□□ 0.73
CCDC188H7C350 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC188H7C350 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC188H7C350 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 AL162430.1-201ENST00000480705 870 ntBASIC19.62■□□□□ 0.73
CCDC188H7C350 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.62■□□□□ 0.73
CCDC188H7C350 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CCDC188H7C350 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC188H7C350 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC188H7C350 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC188H7C350 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC188H7C350 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC188H7C350 RCC2P6-201ENST00000526625 1557 ntBASIC19.61■□□□□ 0.73
CCDC188H7C350 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC188H7C350 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC188H7C350 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC188H7C350 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC188H7C350 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC188H7C350 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC188H7C350 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC188H7C350 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC188H7C350 PNMA6B-201ENST00000538162 1200 ntBASIC19.61■□□□□ 0.73
CCDC188H7C350 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC188H7C350 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC188H7C350 AC022517.1-201ENST00000592429 346 ntBASIC19.61■□□□□ 0.73
CCDC188H7C350 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CCDC188H7C350 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CCDC188H7C350 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC188H7C350 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC188H7C350 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC188H7C350 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC188H7C350 MTMR9LP-203ENST00000426597 1545 ntBASIC19.61■□□□□ 0.73
CCDC188H7C350 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC188H7C350 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC188H7C350 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC188H7C350 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC188H7C350 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC188H7C350 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC188H7C350 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 CDCA4P2-201ENST00000441182 718 ntBASIC19.6■□□□□ 0.73
CCDC188H7C350 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC188H7C350 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC188H7C350 AC060766.5-201ENST00000590539 871 ntBASIC19.6■□□□□ 0.73
CCDC188H7C350 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC188H7C350 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 MYC-208ENST00000641036 567 ntBASIC19.6■□□□□ 0.73
CCDC188H7C350 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC188H7C350 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC188H7C350 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC188H7C350 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.59■□□□□ 0.73
CCDC188H7C350 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC188H7C350 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC188H7C350 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC188H7C350 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms