Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
TMX2-CTNND1H3BSU7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TMX2-CTNND1H3BSU7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TMX2-CTNND1H3BSU7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 AP000523.1-201ENST00000398242 1049 ntBASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 AL031133.1-201ENST00000406807 723 ntBASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 AL358472.4-201ENST00000633140 710 ntBASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 AP000550.4-202ENST00000639755 178 ntBASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMX2-CTNND1H3BSU7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 AL121956.5-201ENST00000625261 221 ntBASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMX2-CTNND1H3BSU7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 CKBP1-201ENST00000565489 1086 ntBASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.48■□□□□ 0.55
TMX2-CTNND1H3BSU7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms