Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RCCD1A6NED2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RCCD1A6NED2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 POM121L13P-201ENST00000422362 380 ntBASIC20.08■□□□□ 0.81
RCCD1A6NED2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.08■□□□□ 0.81
RCCD1A6NED2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.08■□□□□ 0.8
RCCD1A6NED2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.08■□□□□ 0.8
RCCD1A6NED2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCCD1A6NED2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.08■□□□□ 0.8
RCCD1A6NED2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RCCD1A6NED2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 NBPF21P-201ENST00000425093 1451 ntBASIC20.07■□□□□ 0.8
RCCD1A6NED2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 AC008403.3-201ENST00000598924 454 ntBASIC20.07■□□□□ 0.8
RCCD1A6NED2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.07■□□□□ 0.8
RCCD1A6NED2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 FZD10-202ENST00000539839 3282 ntBASIC20.07■□□□□ 0.8
RCCD1A6NED2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RCCD1A6NED2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.06■□□□□ 0.8
RCCD1A6NED2 AC069152.1-201ENST00000438030 544 ntBASIC20.06■□□□□ 0.8
RCCD1A6NED2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 Z85996.1-201ENST00000494644 937 ntBASIC20.06■□□□□ 0.8
RCCD1A6NED2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCCD1A6NED2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
RCCD1A6NED2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.05■□□□□ 0.8
RCCD1A6NED2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCCD1A6NED2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms