Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 AC093525.10-201ENST00000625130 1569 ntBASIC18.87■□□□□ 0.61
CCDC189A1A4V9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 AC084018.2-201ENST00000613093 2607 ntBASIC18.87■□□□□ 0.61
CCDC189A1A4V9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC189A1A4V9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 AC006333.2-201ENST00000607957 2099 ntBASIC18.86■□□□□ 0.61
CCDC189A1A4V9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC189A1A4V9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 AC004264.1-201ENST00000608354 794 ntBASIC18.85■□□□□ 0.61
CCDC189A1A4V9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC189A1A4V9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.84■□□□□ 0.61
CCDC189A1A4V9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 C1QL1P1-201ENST00000568105 661 ntBASIC18.84■□□□□ 0.61
CCDC189A1A4V9 AC092666.2-201ENST00000613287 246 ntBASIC18.84■□□□□ 0.61
CCDC189A1A4V9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 AL162727.3-201ENST00000635661 2787 ntBASIC18.84■□□□□ 0.61
CCDC189A1A4V9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 AC135050.7-201ENST00000624508 2218 ntBASIC18.84■□□□□ 0.61
CCDC189A1A4V9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC189A1A4V9 IRX1P1-201ENST00000438849 1838 ntBASIC18.84■□□□□ 0.61
CCDC189A1A4V9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms