Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC005363.2-201ENST00000618631 242 ntBASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KRT8P9-201ENST00000558927 1449 ntBASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC145285.6-201ENST00000604632 637 ntBASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC006333.2-201ENST00000607957 2099 ntBASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KRT18P22-201ENST00000402024 1347 ntBASIC15.16■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AL049812.1-201ENST00000432563 2267 ntBASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC004980.1-204ENST00000429707 299 ntBASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 B3GAT3P1-201ENST00000471720 806 ntBASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC010331.1-201ENST00000611423 582 ntBASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NEFHP1-201ENST00000412845 2629 ntBASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms