Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 AC005181.1-201ENST00000604782 1256 ntBASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 LSM12P1-201ENST00000411836 588 ntBASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 RPS2P52-201ENST00000469610 820 ntBASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 AC011767.1-201ENST00000617410 1153 ntBASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV3S1A0A5B6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 PCDHA12-202ENST00000613593 2588 ntBASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 TSPY23P-201ENST00000440136 739 ntBASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 AC137761.2-201ENST00000561729 223 ntBASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 AC145350.3-201ENST00000569033 163 ntBASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV3S1A0A5B6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV3S1A0A5B6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
TCRBV3S1A0A5B6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.64■□□□□ 0.42
TCRBV3S1A0A5B6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV3S1A0A5B6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 RCC2P6-201ENST00000526625 1557 ntBASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV3S1A0A5B6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms