Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MIR1224-201ENST00000408193 85 ntBASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CA15P1-201ENST00000481698 905 ntBASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC005363.2-201ENST00000618631 242 ntBASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC006333.2-201ENST00000607957 2099 ntBASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 KRT18P22-201ENST00000402024 1347 ntBASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 HCG11-201ENST00000411553 5696 ntBASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC098818.2-201ENST00000564925 2320 ntBASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms