Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC098934.4-201ENST00000564127 592 ntBASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 ESPNP-201ENST00000270691 2015 ntBASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-7A0A0A0MS04 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 AC133041.1-202ENST00000642053 222 ntBASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 SIRPAP1-201ENST00000448467 1770 ntBASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 AL162741.1-201ENST00000565563 1558 ntBASIC15.79■□□□□ 0.12
TRBV6-7A0A0A0MS04 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 ANO7L1-203ENST00000602586 1720 ntBASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 UNC93B4-201ENST00000505679 747 ntBASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-7A0A0A0MS04 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-7A0A0A0MS04 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms