Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 RNU6-70P-201ENST00000516438 60 ntBASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 AL662814.1-201ENST00000617364 121 ntBASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 MIR4727-201ENST00000622232 55 ntBASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A4AQ96JQ5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 AC062016.1-201ENST00000355719 319 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 RNU1-91P-201ENST00000364746 163 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 RNU6-949P-201ENST00000384040 107 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 RPS27P21-201ENST00000486977 252 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 RNU6-1108P-201ENST00000516308 104 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 RNU6-850P-201ENST00000516934 103 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 MIR3935-201ENST00000583472 104 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 MIR4536-1-201ENST00000583537 88 ntBASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
MS4A4AQ96JQ5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
MS4A4AQ96JQ5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
MS4A4AQ96JQ5 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 MIR22-201ENST00000362190 85 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 RNU6-649P-201ENST00000384463 107 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 MIR597-201ENST00000384968 97 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 SNORD67-201ENST00000390833 111 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 SNORD77.2-201ENST00000391045 68 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 RNA5SP184-201ENST00000411071 108 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
MS4A4AQ96JQ5 WWP1P1-201ENST00000466609 2769 ntBASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 RNA5SP137-201ENST00000516833 135 ntBASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 AL360157.1-201ENST00000565962 87 ntBASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 MIR4500-201ENST00000579472 76 ntBASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 MIR548AO-201ENST00000579992 96 ntBASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 MIR4251-201ENST00000635819 61 ntBASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
MS4A4AQ96JQ5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 RNU5F-1-201ENST00000362507 117 ntBASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 MIR548U-201ENST00000390728 81 ntBASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 RNU4-83P-201ENST00000410863 133 ntBASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 AC022018.1-201ENST00000430685 241 ntBASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 RNA5SP437-201ENST00000517249 129 ntBASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
MS4A4AQ96JQ5 SNORA48.1-201ENST00000390879 135 ntBASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 MIR1265-201ENST00000408444 86 ntBASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 AC011753.1-201ENST00000451001 220 ntBASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 AC099513.1-201ENST00000490423 301 ntBASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MS4A4AQ96JQ5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 AC023790.1-201ENST00000482174 347 ntBASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 AC022202.1-201ENST00000613515 211 ntBASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.54□□□□□ -1.84
MS4A4AQ96JQ5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 MIR627-201ENST00000384979 97 ntBASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 HMGN2P39-201ENST00000398005 273 ntBASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 SNORA18.5-201ENST00000516616 101 ntBASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 RNU6-303P-201ENST00000517091 106 ntBASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 SUB1P4-201ENST00000566062 339 ntBASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MS4A4AQ96JQ5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 MIR1261-201ENST00000408659 82 ntBASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 AC104389.3-201ENST00000445629 235 ntBASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 RNVU1-2-201ENST00000516326 135 ntBASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 RNU6-687P-201ENST00000516443 89 ntBASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 AC008163.1-202ENST00000636004 2889 ntBASIC3.52□□□□□ -1.85
MS4A4AQ96JQ5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 AC092435.3-201ENST00000565538 3654 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 MIR635-201ENST00000384830 98 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 RNU6-587P-201ENST00000391282 106 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 RNU7-26P-201ENST00000458980 63 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 RNU6-322P-201ENST00000516010 103 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 AC138749.4-201ENST00000563970 127 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 MIR4484-201ENST00000582855 83 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 AL096861.1-201ENST00000610899 123 ntBASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MS4A4AQ96JQ5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms