Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.71□□□□□ -1.82
LRCH3Q96II8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LRCH3Q96II8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.7□□□□□ -1.82
LRCH3Q96II8 RNU6-478P-201ENST00000363904 110 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 MIR206-201ENST00000384872 86 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 RNU6-1190P-201ENST00000410811 104 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 RNA5SP508-201ENST00000411327 119 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 AC015922.2-201ENST00000435593 184 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 RNU1-98P-201ENST00000458992 160 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 CKS1BP2-201ENST00000497342 240 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 RN7SL636P-201ENST00000497504 294 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 RNU6-539P-201ENST00000516665 103 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 SNORA48.11-201ENST00000517015 89 ntBASIC3.7□□□□□ -1.82
LRCH3Q96II8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
LRCH3Q96II8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.7□□□□□ -1.82
LRCH3Q96II8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LRCH3Q96II8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRCH3Q96II8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRCH3Q96II8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRCH3Q96II8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRCH3Q96II8 Y_RNA.57-201ENST00000362806 113 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 MIR592-201ENST00000384959 97 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 MIR504-201ENST00000385065 83 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 MIR548G-201ENST00000408442 89 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 RNU6-826P-201ENST00000516827 104 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 AL513043.2-201ENST00000573941 143 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 AC020891.4-201ENST00000605745 93 ntBASIC3.69□□□□□ -1.82
LRCH3Q96II8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
LRCH3Q96II8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.69□□□□□ -1.82
LRCH3Q96II8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
LRCH3Q96II8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRCH3Q96II8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LRCH3Q96II8 MIRLET7C-201ENST00000362160 84 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 MIR423-201ENST00000362201 94 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 RN7SKP111-201ENST00000410349 271 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.68□□□□□ -1.82
LRCH3Q96II8 STAG3L5P-204ENST00000443759 179 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 CYP2C59P-201ENST00000457790 269 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 RNU1-41P-201ENST00000516161 162 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 RNU1-48P-201ENST00000516400 162 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.68□□□□□ -1.82
LRCH3Q96II8 MIR6717-201ENST00000622747 73 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 MIR7157-201ENST00000635801 60 ntBASIC3.68□□□□□ -1.82
LRCH3Q96II8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRCH3Q96II8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRCH3Q96II8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.67□□□□□ -1.82
LRCH3Q96II8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 RNU6-862P-201ENST00000362804 105 ntBASIC3.67□□□□□ -1.82
LRCH3Q96II8 RNU7-153P-201ENST00000516455 62 ntBASIC3.67□□□□□ -1.82
LRCH3Q96II8 RNU7-53P-201ENST00000516705 60 ntBASIC3.67□□□□□ -1.82
LRCH3Q96II8 RNU6-958P-201ENST00000516995 106 ntBASIC3.67□□□□□ -1.82
LRCH3Q96II8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.67□□□□□ -1.82
LRCH3Q96II8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
LRCH3Q96II8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.67□□□□□ -1.82
LRCH3Q96II8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRCH3Q96II8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
LRCH3Q96II8 AC093831.2-201ENST00000624393 3427 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRCH3Q96II8 RNU6-1094P-201ENST00000362416 104 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 SNORA70.7-201ENST00000384159 133 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 Z98941.1-201ENST00000407764 100 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 RNA5SP261-201ENST00000410536 106 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 AC108938.1-201ENST00000451204 136 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 RNU6-667P-201ENST00000517186 102 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 DNAJC19P9-201ENST00000555084 351 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
LRCH3Q96II8 MIR4791-201ENST00000607666 84 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 AP003355.3-201ENST00000623465 114 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 AC027279.3-201ENST00000625055 122 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 AC110079.1-202ENST00000635213 138 ntBASIC3.66□□□□□ -1.82
LRCH3Q96II8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRCH3Q96II8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.65□□□□□ -1.82
LRCH3Q96II8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LRCH3Q96II8 RNA5SP109-201ENST00000391010 116 ntBASIC3.65□□□□□ -1.83
LRCH3Q96II8 RNU7-67P-201ENST00000459003 62 ntBASIC3.65□□□□□ -1.83
LRCH3Q96II8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.65□□□□□ -1.83
LRCH3Q96II8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.65□□□□□ -1.83
LRCH3Q96II8 MIR4319-201ENST00000577285 85 ntBASIC3.65□□□□□ -1.83
LRCH3Q96II8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.65□□□□□ -1.83
LRCH3Q96II8 AL356280.1-201ENST00000603614 379 ntBASIC3.65□□□□□ -1.83
LRCH3Q96II8 AC110741.2-201ENST00000605278 268 ntBASIC3.65□□□□□ -1.83
LRCH3Q96II8 RNU6-90P-201ENST00000606352 106 ntBASIC3.65□□□□□ -1.83
LRCH3Q96II8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRCH3Q96II8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRCH3Q96II8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRCH3Q96II8 AL450471.1-201ENST00000447509 127 ntBASIC3.64□□□□□ -1.83
LRCH3Q96II8 AC125388.1-201ENST00000459631 156 ntBASIC3.64□□□□□ -1.83
LRCH3Q96II8 AC008885.1-201ENST00000514930 301 ntBASIC3.64□□□□□ -1.83
LRCH3Q96II8 SNORA70.14-201ENST00000516205 110 ntBASIC3.64□□□□□ -1.83
LRCH3Q96II8 SNORA25.13-201ENST00000516395 103 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms