Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF39Q9H2S5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF39Q9H2S5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF39Q9H2S5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF39Q9H2S5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RNF39Q9H2S5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF39Q9H2S5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 SNORA48.1-201ENST00000390879 135 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 SNORD66.1-201ENST00000391230 76 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 SNORA48.7-201ENST00000391302 135 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 MIR1911-201ENST00000410783 80 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 RNA5SP73-201ENST00000516744 108 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 MIR6740-201ENST00000618268 113 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 AL592182.3-201ENST00000642132 3304 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 AC008079.2-201ENST00000623543 20396 ntBASIC4.63□□□□□ -1.67
RNF39Q9H2S5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF39Q9H2S5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF39Q9H2S5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF39Q9H2S5 SPRR2C-201ENST00000290702 219 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 Y_RNA.330-201ENST00000365230 109 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 RNA5SP283-201ENST00000365604 119 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 SNORA26.7-201ENST00000391288 122 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 RNU6-1165P-201ENST00000410119 107 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 GNG5P5-201ENST00000420444 220 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 TRBV12-2-201ENST00000489763 344 ntBASIC4.62□□□□□ -1.67
RNF39Q9H2S5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF39Q9H2S5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF39Q9H2S5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RNF39Q9H2S5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
RNF39Q9H2S5 AP001486.2-201ENST00000561652 5113 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 RNU6-986P-201ENST00000363133 102 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 SNORA25.3-201ENST00000363205 127 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 RNA5SP130-201ENST00000364431 114 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 RNU1-44P-201ENST00000384453 163 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 SNORD116.2-201ENST00000391251 93 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 RNU6-1328P-201ENST00000410938 106 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 AC097635.1-201ENST00000450678 155 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 AC011753.1-201ENST00000451001 220 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 HMGN2P16-201ENST00000456802 261 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 AC026726.1-201ENST00000512859 601 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC4.61□□□□□ -1.67
RNF39Q9H2S5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF39Q9H2S5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 MIR23B-201ENST00000384832 97 ntBASIC4.6□□□□□ -1.67
RNF39Q9H2S5 AL031183.1-201ENST00000457667 207 ntBASIC4.6□□□□□ -1.67
RNF39Q9H2S5 MIR2116-201ENST00000517221 80 ntBASIC4.6□□□□□ -1.67
RNF39Q9H2S5 AC006064.5-201ENST00000541782 248 ntBASIC4.6□□□□□ -1.67
RNF39Q9H2S5 AC022513.1-201ENST00000624512 117 ntBASIC4.6□□□□□ -1.67
RNF39Q9H2S5 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF39Q9H2S5 MAPK10-303ENST00000641324 3959 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 RNA5SP51-201ENST00000364750 119 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 RNU6-54P-201ENST00000365563 107 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 MT-TF-201ENST00000387314 71 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 AC009474.2-201ENST00000451383 136 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 AC025033.1-201ENST00000463883 194 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 SNORA40.16-201ENST00000517238 121 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.59□□□□□ -1.67
RNF39Q9H2S5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF39Q9H2S5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF39Q9H2S5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF39Q9H2S5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF39Q9H2S5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF39Q9H2S5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF39Q9H2S5 Y_RNA.56-201ENST00000362798 112 ntBASIC4.58□□□□□ -1.68
RNF39Q9H2S5 RNU6-260P-201ENST00000384092 107 ntBASIC4.58□□□□□ -1.68
RNF39Q9H2S5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF39Q9H2S5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF39Q9H2S5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms