Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC1.03□□□□□ -2.25
KRTAP4-4Q9BYR3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AP002512.4-202ENST00000641599 4530 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR375-201ENST00000362103 64 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR424-201ENST00000362227 98 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP191-201ENST00000362585 102 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-249P-201ENST00000363016 102 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORA58B-201ENST00000364259 136 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-43P-201ENST00000365052 165 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR92A2-201ENST00000385299 75 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-258P-201ENST00000390884 101 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL023284.1-201ENST00000403956 276 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SPTLC1P2-201ENST00000407089 121 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR548N-201ENST00000408742 75 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 EEF1A1P41-201ENST00000414667 207 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AC123900.1-201ENST00000420390 96 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 BX510359.4-201ENST00000423750 193 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 TMEM183AP1-205ENST00000432739 290 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL513328.1-201ENST00000446460 224 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL826P-201ENST00000479724 288 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 TRBV12-1-201ENST00000479785 344 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 IGLV2-34-201ENST00000490007 283 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL671862.1-201ENST00000515851 349 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD63.1-201ENST00000516178 80 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU7-43P-201ENST00000516554 64 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP449-201ENST00000516871 130 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 IGLV3-24-201ENST00000517477 197 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AC021678.3-201ENST00000517893 476 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL049872.1-201ENST00000556323 322 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AC108676.2-201ENST00000605225 163 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 Mico1.1-201ENST00000611698 204 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 U1.25-201ENST00000614085 162 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL627230.5-201ENST00000619807 58 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AC006111.3-201ENST00000622137 383 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 AL691477.1-201ENST00000624398 162 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 U6.96-201ENST00000636425 70 ntBASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-4Q9BYR3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms