Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.2□□□□□ -1.9
ECM1Q16610 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
ECM1Q16610 RNU1-58P-201ENST00000362413 163 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 RNU6-228P-201ENST00000362700 106 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 Y_RNA.634-201ENST00000364811 113 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 RNU6-1014P-201ENST00000383940 103 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 MIR181B1-201ENST00000385240 110 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.19□□□□□ -1.9
ECM1Q16610 RNU7-26P-201ENST00000458980 63 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 RNU6-970P-201ENST00000516312 107 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 RNA5SP281-201ENST00000516504 135 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 RPPH1-2P-201ENST00000516688 293 ntBASIC3.19□□□□□ -1.9
ECM1Q16610 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ECM1Q16610 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.19□□□□□ -1.9
ECM1Q16610 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ECM1Q16610 RNU6-862P-201ENST00000362804 105 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 RNY1P10-201ENST00000363268 113 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 Y_RNA.323-201ENST00000365157 109 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.18□□□□□ -1.9
ECM1Q16610 RNU6-158P-201ENST00000517104 100 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 RNU7-128P-201ENST00000517247 62 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 RNU1-104P-201ENST00000517280 175 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 AC097639.2-201ENST00000603159 172 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.18□□□□□ -1.9
ECM1Q16610 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.18□□□□□ -1.9
ECM1Q16610 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ECM1Q16610 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ECM1Q16610 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECM1Q16610 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ECM1Q16610 MIR126-201ENST00000362291 85 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 Y_RNA.220-201ENST00000364244 109 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 Y_RNA.253-201ENST00000364562 112 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 AL117342.1-201ENST00000404861 406 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 RNA5SP225-201ENST00000410874 135 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 AL163195.1-201ENST00000496941 348 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 RNA5SP137-201ENST00000516833 135 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 AL022345.2-201ENST00000606307 135 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 SCARNA15.3-201ENST00000626315 122 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 SCARNA4.1-201ENST00000628597 123 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
ECM1Q16610 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECM1Q16610 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECM1Q16610 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECM1Q16610 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.17□□□□□ -1.9
ECM1Q16610 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ECM1Q16610 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
ECM1Q16610 SNORD115-3-201ENST00000363100 82 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 RNU6-1113P-201ENST00000384348 107 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 Y_RNA.528-201ENST00000384575 108 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 RNU6-950P-201ENST00000384651 107 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 MIR512-1-201ENST00000384913 84 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 MIR891A-201ENST00000401237 79 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 CALM2P4-201ENST00000430810 426 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 AC003982.1-202ENST00000469928 248 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 RN7SKP132-201ENST00000516001 208 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 RNU6-109P-201ENST00000516364 107 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 SNORA18.4-201ENST00000516440 124 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 RNU6-184P-201ENST00000516514 107 ntBASIC3.16□□□□□ -1.9
ECM1Q16610 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECM1Q16610 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECM1Q16610 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECM1Q16610 MIR570-201ENST00000384917 97 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 RNA5SP482-201ENST00000391269 118 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 MIR1263-201ENST00000408324 86 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 MTATP8P2-201ENST00000435212 202 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 AL021397.1-201ENST00000451806 248 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 RPL39P34-201ENST00000477141 156 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 EIF4BP1-201ENST00000554881 351 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 MIR3169-201ENST00000578032 83 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 AC069114.2-201ENST00000604699 304 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 SNORA28-201ENST00000606769 126 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.91
ECM1Q16610 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
ECM1Q16610 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
ECM1Q16610 MIR494-201ENST00000349529 81 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 Y_RNA.52-201ENST00000362760 96 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 Y_RNA.221-201ENST00000364248 96 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 RNU1-112P-201ENST00000364401 164 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 RNU6-1019P-201ENST00000364424 107 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 MIR590-201ENST00000385008 97 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 FTH1P12-201ENST00000432137 551 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
ECM1Q16610 SNORA59A-201ENST00000459326 152 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 AC092185.1-201ENST00000491371 97 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 RNU6-56P-201ENST00000516986 93 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.14□□□□□ -1.91
ECM1Q16610 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 AL035470.1-201ENST00000622571 220 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 AC006386.2-201ENST00000624491 75 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 AC012005.1-201ENST00000624575 75 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 CTSLP2-204ENST00000629029 392 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 U6.108-201ENST00000637764 58 ntBASIC3.14□□□□□ -1.91
ECM1Q16610 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ECM1Q16610 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms