Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 AC006128.1-201ENST00000624704 1661 ntBASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN4Q9Y3Q4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 AF238378.1-201ENST00000526806 358 ntBASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.33■□□□□ 0.68
HCN4Q9Y3Q4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 AC134684.3-201ENST00000641758 218 ntBASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 LINC00167-201ENST00000530583 1419 ntBASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN4Q9Y3Q4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 AC139887.3-201ENST00000568585 713 ntBASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 AC011467.4-201ENST00000594891 528 ntBASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCN4Q9Y3Q4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms