Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC112497.1-201ENST00000624824 639 ntBASIC25.84■■□□□ 1.73
NINLQ9Y2I6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NINLQ9Y2I6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 LINC01311-201ENST00000565162 1445 ntBASIC25.83■■□□□ 1.73
NINLQ9Y2I6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NINLQ9Y2I6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
NINLQ9Y2I6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
NINLQ9Y2I6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC25.83■■□□□ 1.72
NINLQ9Y2I6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 VENTXP5-201ENST00000523979 775 ntBASIC25.82■■□□□ 1.72
NINLQ9Y2I6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 AC068587.9-201ENST00000641814 219 ntBASIC25.82■■□□□ 1.72
NINLQ9Y2I6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 AC008556.1-201ENST00000610908 2040 ntBASIC25.82■■□□□ 1.72
NINLQ9Y2I6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 AC024243.1-201ENST00000609234 778 ntBASIC25.82■■□□□ 1.72
NINLQ9Y2I6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
NINLQ9Y2I6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.81■■□□□ 1.72
NINLQ9Y2I6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 MIR3917-201ENST00000580971 93 ntBASIC25.8■■□□□ 1.72
NINLQ9Y2I6 AC006538.3-201ENST00000612495 578 ntBASIC25.8■■□□□ 1.72
NINLQ9Y2I6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
NINLQ9Y2I6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 MIR564-202ENST00000385049 94 ntBASIC25.79■■□□□ 1.72
NINLQ9Y2I6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms