Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPO2Q9UMS6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 PCDHAC2-203ENST00000615316 3011 ntBASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 KRT18P41-201ENST00000518924 1277 ntBASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 AC010240.3-201ENST00000607688 395 ntBASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYNPO2Q9UMS6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 AC092597.1-201ENST00000487352 616 ntBASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 HEIH-201ENST00000623091 1652 ntBASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPO2Q9UMS6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 AL645929.1-201ENST00000420084 975 ntBASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 AL157888.1-201ENST00000631930 593 ntBASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SYNPO2Q9UMS6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AC006333.2-201ENST00000607957 2099 ntBASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AC069148.1-201ENST00000608741 768 ntBASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AC079602.3-201ENST00000623931 403 ntBASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms