Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GTF3C4Q9UKN8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.34■□□□□ 0.85
GTF3C4Q9UKN8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 AC120498.9-201ENST00000339021 3867 ntBASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 AL138781.2-201ENST00000617896 1843 ntBASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.33■□□□□ 0.85
GTF3C4Q9UKN8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GTF3C4Q9UKN8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 AC005521.1-201ENST00000393351 872 ntBASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 SLC25A3P1-201ENST00000443844 931 ntBASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF3C4Q9UKN8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 AC128688.1-201ENST00000487626 519 ntBASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF3C4Q9UKN8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 AC113347.1-201ENST00000413321 391 ntBASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SLC25A1P2-201ENST00000430693 912 ntBASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 PRSS44-201ENST00000515154 1146 ntBASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 RN7SL850P-201ENST00000579959 291 ntBASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 AC116562.4-202ENST00000641738 218 ntBASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 FEM1AP3-201ENST00000403722 1741 ntBASIC20.3■□□□□ 0.84
GTF3C4Q9UKN8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms