Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 AL109659.2-201ENST00000606809 1674 ntBASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 TEX21P-204ENST00000641479 1693 ntBASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GTF2IRD1Q9UHL9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 AP002414.4-201ENST00000589764 1148 ntBASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 AL512353.2-201ENST00000448759 1962 ntBASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GTF2IRD1Q9UHL9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.77■□□□□ 0.91
GTF2IRD1Q9UHL9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
GTF2IRD1Q9UHL9 TREX1-205ENST00000625293 1783 ntBASIC20.77■□□□□ 0.91
GTF2IRD1Q9UHL9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
GTF2IRD1Q9UHL9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
GTF2IRD1Q9UHL9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 RCC2P3-201ENST00000418112 1537 ntBASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF2IRD1Q9UHL9 AC008556.1-201ENST00000610908 2040 ntBASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 CHCHD2P8-201ENST00000429873 447 ntBASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 KRT8P7-201ENST00000533003 1432 ntBASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.75■□□□□ 0.91
GTF2IRD1Q9UHL9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms